Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_D23
(446 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.020
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.14
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 30 0.14
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 30 0.14
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.25
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 29 0.25
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 29 0.43
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 29 0.43
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 28 0.57
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 28 0.57
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 0.75
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 28 0.75
SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|... 27 0.99
SPCC61.05 |||S. pombe specific multicopy membrane protein family... 27 1.7
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 27 1.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 2.3
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 2.3
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 26 3.0
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 26 3.0
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 25 4.0
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 25 5.3
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 25 5.3
SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomy... 25 5.3
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 25 5.3
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 25 5.3
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 25 7.0
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 25 7.0
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 7.0
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 7.0
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 25 7.0
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 24 9.3
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 24 9.3
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 24 9.3
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 24 9.3
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 33.1 bits (72), Expect = 0.020
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = -3
Query: 288 ILTVGCRLYVTF*ILFFCIWLI-YISVT----LGLRILKPQRLTLRVLG*LIFSCLTIAS 124
+LT+ C +V F I +FC L+ YIS + GL+I L + + ++
Sbjct: 6 VLTIRCTFHVLFAICYFCDHLLQYISNSRDSKAGLKIFLVFELAVTIFNTVMLQLANRVK 65
Query: 123 TGFLVFILIVTDFCFIRYH 67
G + ILIV+ F+ YH
Sbjct: 66 NGLTLAILIVSVVMFV-YH 83
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.14
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 91 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGDVKT 270
S ++D D SS+ D +E ESS + S DSE++ +++ + + E + +
Sbjct: 121 SSSEDNDSSSSSSD---SESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSS 177
Query: 271 TAN 279
N
Sbjct: 178 EDN 180
Score = 30.3 bits (65), Expect = 0.14
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 91 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGDVKT 270
S ++D D SS+ D +E ESS + S DSE++ +++ + + E + +
Sbjct: 175 SSSEDNDSSSSSSD---SESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSS 231
Query: 271 TAN 279
N
Sbjct: 232 EDN 234
Score = 29.9 bits (64), Expect = 0.19
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 19 EDAWNSLSISS*EKCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDS 198
ED+ +S S S E D S++ D + SS+ D +E ESS + + DS
Sbjct: 250 EDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSS-DSSDSESESSSEDSDSTSSSSDS 308
Query: 199 EA-----QGNADVDQPDAKEENLEGDVKTTAN 279
++ GN++ D + E + + +T++
Sbjct: 309 DSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSS 340
Score = 29.5 bits (63), Expect = 0.25
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 91 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGD 261
S ++D D SS+ D +E ESS + S DSE++ ++ + + E D
Sbjct: 229 SSSEDNDSSSSSSD---SESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDD 282
Score = 28.7 bits (61), Expect = 0.43
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 73 PDKAKISDNQDEDKKSST-GDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 249
P+KA S SS D ++E ESS + S DSE++ +++ + +
Sbjct: 93 PEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSD 152
Query: 250 LEGD 261
E +
Sbjct: 153 SESE 156
Score = 26.6 bits (56), Expect = 1.7
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 22 DAWNSLSISS*EKCRVIPDKAKISDNQDEDKKS----STGDGQTTEDESSQDSKGESLRF 189
D+ +S S S E D + S + + + S S+ ++E ESS + S
Sbjct: 127 DSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSS 186
Query: 190 QDSEAQGNADVDQPDAKEENLEGD 261
DSE++ +++ + + E +
Sbjct: 187 SDSESESSSEDSDSSSSSSDSESE 210
Score = 26.6 bits (56), Expect = 1.7
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 22 DAWNSLSISS*EKCRVIPDKAKISDNQDEDKKS----STGDGQTTEDESSQDSKGESLRF 189
D+ +S S S E D + S + + + S S+ ++E ESS + S
Sbjct: 181 DSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSS 240
Query: 190 QDSEAQGNADVDQPDAKEENLEGD 261
DSE++ +++ + + E +
Sbjct: 241 SDSESESSSEDSDSSSSSSDSESE 264
Score = 24.2 bits (50), Expect = 9.3
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 76 DKAKISDNQDEDKKSSTGDGQT-TEDESSQDSKGESLRFQDSEAQGNADVDQPDAK 240
D S + D D SS+ DG + T+ +S + +S S + + D+ +K
Sbjct: 298 DSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSK 353
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 30.3 bits (65), Expect = 0.14
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 76 DKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVD-QPDAKEENL 252
D+ + + Q D+K + + TTE+ S+ + E++ +S ++ QP + + +
Sbjct: 242 DEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETVNDLESAVSKGLQIETQPASHDGEV 301
Query: 253 EGDVK 267
+G+VK
Sbjct: 302 DGEVK 306
Score = 25.8 bits (54), Expect = 3.0
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 67 VIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSE--AQGNADVDQPDAK 240
V P KA I DE++ S GD ++ E+ES + + + E + N+ + D
Sbjct: 218 VQPIKA-IQSGNDEEEIFSWGDERSDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDET 276
Query: 241 EENLEGDV 264
+LE V
Sbjct: 277 VNDLESAV 284
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 30.3 bits (65), Expect = 0.14
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Frame = +1
Query: 55 EKCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQ-- 228
E+ V+P+ K D QD+D T + +D+ D E NAD+
Sbjct: 216 EQKSVLPNAVKNIDGQDDDSSEQTAAFEEYDDDDDDDVDDNEQSNSMIETSANADITPKA 275
Query: 229 ---PDAKEENLEGDVKTT 273
P E ++ D +T+
Sbjct: 276 SLLPSTTESSISKDHETS 293
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 29.5 bits (63), Expect = 0.25
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = +1
Query: 91 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLR--FQD---------SEAQGNADVDQPDA 237
SD D D SS TTE+ ++Q K E L F+D S N VD+ A
Sbjct: 981 SDIDDNDSNSSNTSNHTTENANAQQRKLEDLNRSFEDFLGSRPTNNSSFLKNVSVDEDTA 1040
Query: 238 KEENLEGD 261
+E+ +E D
Sbjct: 1041 REKLMEYD 1048
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 29.5 bits (63), Expect = 0.25
Identities = 26/83 (31%), Positives = 38/83 (45%)
Frame = +1
Query: 19 EDAWNSLSISS*EKCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDS 198
++A S S+S+ + P + SDN+DED+ ED SQD + E + ++S
Sbjct: 96 QEATTSPSLSASHEKPARPQTGEGSDNEDEDEDIDA----LIEDLYSQDQEEEQVEEEES 151
Query: 199 EAQGNADVDQPDAKEENLEGDVK 267
A P EE LE D K
Sbjct: 152 PGPAGAAKVVP---EELLETDPK 171
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 28.7 bits (61), Expect = 0.43
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 103 DEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGDVK 267
+ED + G+ EDE +D GE + + + Q N ++D+ D +E + + D++
Sbjct: 50 EEDIEDLDGEALDVEDEEGEDLFGEGM---ERDYQQNLELDRYDIEELDDDNDLE 101
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.7 bits (61), Expect = 0.43
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 94 DNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEG 258
DN++EDK+ + + + T+DE + K ++ Q+ V QP + ++ +G
Sbjct: 196 DNKEEDKEIHSEENE-TKDEIKSEKKEPEIKKQEG-GSSTEKVGQPSSSDDKAKG 248
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 28.3 bits (60), Expect = 0.57
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 76 DKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLE 255
+KA N DE K D +TTE++ + + + + QD GN+ ++P K E LE
Sbjct: 832 EKASKGSNDDEMKI----DKKTTEEKEATPMEMDEEKSQDISINGNSKKEEP--KSETLE 885
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 28.3 bits (60), Expect = 0.57
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 369 CLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVTF*-ILFFCIWLIYISVTLGLRI 193
CL ILLL + + + + +VI V + V IL+ C WLIY + L I
Sbjct: 129 CLFILLLLGLIYCSKIVVKAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILAFGI 188
Query: 192 -LKPQRLTL 169
+KP TL
Sbjct: 189 KVKPLGDTL 197
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 27.9 bits (59), Expect = 0.75
Identities = 16/68 (23%), Positives = 25/68 (36%)
Frame = +1
Query: 28 WNSLSISS*EKCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQ 207
W+S S +K + I N + + S D E+E D + E+ F +
Sbjct: 35 WSSEESESEDKESNLTSSENIGKNPERELNSDGTDRIIEEEEEEDDIENEASSFSEQSEN 94
Query: 208 GNADVDQP 231
N D P
Sbjct: 95 ENYDFSYP 102
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 27.9 bits (59), Expect = 0.75
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 369 CLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVTF*-ILFFCIWLIYISVTLGLRI 193
CL +LLL + + + + +VI V + V IL+ C WLIY + L I
Sbjct: 129 CLFVLLLLGLIYCSKIVVKAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILAFGI 188
Query: 192 -LKPQRLTL 169
+KP TL
Sbjct: 189 KVKPLGDTL 197
>SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 27.5 bits (58), Expect = 0.99
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 73 PDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNAD 219
P+ + +++D +SS+ T ED DS+ ES R + S+ G +
Sbjct: 46 PEAGPLVQEEEDDMESSSYHA-TQEDIGDDDSRSESTRNRSSQHTGRVN 93
>SPCC61.05 |||S. pombe specific multicopy membrane protein family
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 469
Score = 26.6 bits (56), Expect = 1.7
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3
Query: 243 FFCIWLIYISVTLGLRILKPQRLTLRVLG*-LIFSCLTIASTGFLVFILIVTDFCFIRYH 67
+ + + +S L L +++P + LG LI SC+T F+ + F F++Y
Sbjct: 385 YIALAAVTVSNCLFLGVVRPLLGSQLSLGFQLITSCITFVDFLVFAFLFDCSKFVFLKYQ 444
Query: 66 PTFF 55
P F
Sbjct: 445 PIPF 448
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 26.6 bits (56), Expect = 1.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 55 EKCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPD 234
E+C+V K + ++ + +S + QTT D S+ K S D N +V D
Sbjct: 390 EECKVSKSILKTTPSKKANARSVSFT-QTTTDTLSESEKFASNVDLDENFDFNVNVTNED 448
Query: 235 AKE--ENLEGDVKTTAN 279
AK+ +++ G TT N
Sbjct: 449 AKQLKKSVIGSSWTTVN 465
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 2.3
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +1
Query: 91 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEE 246
++ + E S+ D +++ D SS+ G+S DSE++ +++ D+ K E
Sbjct: 194 TEEKKEGSSESSSDSESSSDSSSES--GDSDSSSDSESESSSE-DEKKRKAE 242
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 26.2 bits (55), Expect = 2.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 88 ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQD 195
+SDN DE++ S G ++ E D + R ++
Sbjct: 168 VSDNTDEERTESKGQQESNSAEEYDDDDSDEDRMEE 203
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 3.0
Identities = 12/60 (20%), Positives = 25/60 (41%)
Frame = +1
Query: 94 DNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGDVKTT 273
++ D DK+ +T D + E+E+ +++ + + Q P A + K T
Sbjct: 279 ESLDADKELATNDQEDDEEENQAETQKDGAISNNENMQSEVQTTNPSASTSAVTNITKPT 338
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 3.0
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 97 NQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 249
N+ E ++ G+ +T ++S KG+ +DS + A + + DA ++
Sbjct: 421 NKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSVFETRAKIYRFDATSKS 471
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 4.0
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 79 KAKISDNQDEDKKSSTGDGQTTEDESSQ-DSKGESLRFQDSEAQGNADVDQPDAKEENLE 255
KAK +D+ + + K D + TED+ + +SK ++ ++++ + +VD + K ++ E
Sbjct: 459 KAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETD---SIEVDDKEEKTDSKE 515
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 25.0 bits (52), Expect = 5.3
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 145 EDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 249
E+E + K + +R Q+ E NAD D D+ +
Sbjct: 493 EEEKREREKSKGIRGQEEEFIENADEDNNDSSSSS 527
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 25.0 bits (52), Expect = 5.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 124 TGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGDVKTTAN 279
T D + EDE + K +S RF D E D+D+ + + E + ++ N
Sbjct: 1391 TEDSEDEEDEEPKRKKSKSDRFDDEE----KDLDEIPSTAADFERQLLSSPN 1438
>SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 656
Score = 25.0 bits (52), Expect = 5.3
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Frame = +1
Query: 58 KCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGN---ADVDQ 228
K + P ++ + +N E+ + + + DE+ KG+ + EA + +
Sbjct: 47 KLNISPSESNLPNNVAENTTDTPVNYGSIRDENHNSRKGKDVTLNSDEAHSENVPSTSED 106
Query: 229 PDAKEENLEGDVKTTAN 279
PD +L G N
Sbjct: 107 PDVVRRHLGGQAADDDN 123
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 5.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 94 DNQDEDKKSSTGDGQTTEDESSQDSK 171
D +ED++ S ++ EDES D K
Sbjct: 373 DENEEDEEDSEETSESEEDESVNDEK 398
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 25.0 bits (52), Expect = 5.3
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 55 EKCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPD 234
EK R +K KIS + DK D +TT+ + K +S + E Q N +
Sbjct: 26 EKKRYEDEKRKISHQKYTDKLLEANDNETTKRKLLVKQKRKS----NKEFQSNIIKKR-- 79
Query: 235 AKEENLEGDVKT 270
K+E +G +KT
Sbjct: 80 -KDEERKGTLKT 90
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 24.6 bits (51), Expect = 7.0
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 13 VFEDAWNSLSISS*EKCRVIPDKAK-ISDNQDEDKKSSTGDGQTTEDESSQ 162
++ED N +S +C P K + + N+ E S GD +++ED+ +Q
Sbjct: 286 LYEDIRNQ-RVSYCNECGKPPLKLRRVGQNKKEKHYFSDGDSESSEDDLAQ 335
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 24.6 bits (51), Expect = 7.0
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +1
Query: 58 KCRVIPDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEA 204
K + D K+S + TGD T D S S + L + S A
Sbjct: 55 KVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKSGHSSSQKLSNKVSSA 103
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 24.6 bits (51), Expect = 7.0
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +1
Query: 88 ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 249
+S +++ ++ +GD ++ E+ S+D+ DS A V + K+E+
Sbjct: 139 LSPTEEDLVETVSGDEESEEESESEDNSASEEDELDSAPAKKAQVKKKRTKDES 192
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 24.6 bits (51), Expect = 7.0
Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 79 KAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRF--QDSEAQGNADVDQPDAKEENL 252
+ K S + +++ SST + T + + S+ E+++ + + + + KEE +
Sbjct: 302 RKKKSIPKKQNESSSTIQKENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIKEEEM 361
Query: 253 EGD 261
EG+
Sbjct: 362 EGE 364
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 24.6 bits (51), Expect = 7.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Frame = +1
Query: 115 KSSTG-DGQTTEDESSQDSKGESLRFQDS--------EAQGNADVDQPDAKEENL 252
KS G +G+TTE + D++G+S FQ S + Q +A +PD +E L
Sbjct: 464 KSHIGLNGETTELIENTDNQGDSGSFQTSTPDDSRPEQNQASATYIRPDKREPRL 518
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 24.2 bits (50), Expect = 9.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 91 SDNQDEDKKSSTGDGQTTEDESSQDS 168
++ +++D K STGD TT+ S D+
Sbjct: 422 NNKKEDDLKDSTGDLNTTQVSSRVDN 447
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 24.2 bits (50), Expect = 9.3
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 97 NQDEDKKSSTGDGQTTEDESSQDSKGESLRF-QDSEAQGNADVDQPDAKEENLEGDV 264
++D++ S +T + ++ E F QDS+A+GN + + EE + D+
Sbjct: 964 SEDDEIPLSDARNKTKKRRVNRRVISEEYTFDQDSDAEGNQEEEVSRTIEEKQDNDI 1020
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 24.2 bits (50), Expect = 9.3
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 58 KCRVIPDKAKISD---NQDEDKKSSTGDGQTTEDESSQDSKGES 180
K ++ D +I D ++DE++K +GD + ++ +DS+ E+
Sbjct: 185 KIEILEDDEEIEDVASDKDEEEKPWSGDEEDDDELVVKDSEDET 228
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 24.2 bits (50), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 114 LVFILIVTDFCFIRYH 67
L+F +I T FC RYH
Sbjct: 199 LLFFIISTFFCLSRYH 214
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.305 0.125 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,313,317
Number of Sequences: 5004
Number of extensions: 21857
Number of successful extensions: 99
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 164204010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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