Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_D21
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29443-11|CAK55173.1|  367|Caenorhabditis elegans Hypothetical p...    27   5.3  
Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical pr...    26   9.3  

>Z29443-11|CAK55173.1|  367|Caenorhabditis elegans Hypothetical
           protein T07C4.11 protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +3

Query: 159 ITCAEWISIVARETRDDFYKPAKISAY*HWTSLPSVLTATETW 287
           + C  W S  +     D Y+   I A   WT L S + ++ +W
Sbjct: 119 VNCEPWTSEKSENPFGDDYRFVYIGASGSWTKLHSDVVSSHSW 161


>Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical
           protein AH10.3 protein.
          Length = 282

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 48  CHHFSLSPSTAEHR 7
           C HFS SPS  +HR
Sbjct: 265 CRHFSYSPSREQHR 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,533,119
Number of Sequences: 27780
Number of extensions: 137243
Number of successful extensions: 285
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)