Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_D16
         (410 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0684 + 5828947-5829012,5831123-5832103,5832200-5832326,583...    31   0.47 

>12_01_0684 +
           5828947-5829012,5831123-5832103,5832200-5832326,
           5832623-5832705,5832752-5832917,5833337-5833399,
           5833624-5833733,5834227-5834276,5834528-5834664,
           5835180-5835281,5835871-5835988,5836575-5836627,
           5836710-5836813,5836910-5836972,5837375-5837503,
           5837508-5837605,5838446-5838500,5839260-5839311,
           5839996-5840113,5841906-5842035,5842156-5842437
          Length = 1028

 Score = 30.7 bits (66), Expect = 0.47
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +2

Query: 86  LLCFVAYLAVVQTEPL-PIVSSIATAGGAGEDVAASALSQHQGW*NLRKRPLARVK 250
           L+   + LA+  T+P+   + S    GGAG+D A++ L  HQ + ++ ++ L++ K
Sbjct: 412 LVIIGSVLALYGTDPVCHFLPSELVTGGAGDDEASTLLQDHQLFSDMLQQQLSKAK 467


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,421,006
Number of Sequences: 37544
Number of extensions: 123707
Number of successful extensions: 385
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)