Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_D12
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...   112   2e-25
Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...    64   8e-11
U41023-3|AAA82342.2|  435|Caenorhabditis elegans Arrestin family...    31   0.93 
Z81050-7|CAB02853.1|  154|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF099918-1|AAK29840.2|  820|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      28   6.6  
AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    27   8.7  
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    27   8.7  
AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical...    27   8.7  
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical...    27   8.7  

>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score =  112 bits (270), Expect = 2e-25
 Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
 Frame = +2

Query: 263 HRTGPHIKKRKSRNP--LNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAY 436
           +R GP  ++ +S++   ++G    KG+VLKTVI+ PKKPNS NRKC +VRLS G E+ AY
Sbjct: 53  YRNGPPKRRARSKDKSAISGYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRLSTGAEVCAY 112

Query: 437 IPGIGHNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHD 547
           IP +GHNLQEH+ VLV+ GR +D   VK   VRGK+D
Sbjct: 113 IPNVGHNLQEHSQVLVKGGRRRDLISVKANIVRGKYD 149


>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
 Frame = +2

Query: 278 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 451
           HI  R   NP  G   AKG+VL+ +  + K+PNSA RKCV V+L  NGK++ A++P  G 
Sbjct: 31  HIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGC 90

Query: 452 -HNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 535
            + ++E++ VLV   GR    + D PGV+ K V+
Sbjct: 91  LNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVK 124


>U41023-3|AAA82342.2|  435|Caenorhabditis elegans Arrestin family
           protein 1 protein.
          Length = 435

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 281 IKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMV 430
           +K R    PLNG  FA+     T  K P+ P   +R    +  +NG E V
Sbjct: 337 VKVRAVLGPLNGELFAELPFTLTHSKPPESPERTDRGLPSIEATNGSEPV 386


>Z81050-7|CAB02853.1|  154|Caenorhabditis elegans Hypothetical
           protein C50B6.9 protein.
          Length = 154

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 383 NRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKD 505
           N K ++ R+++  +    IPG+ HN      VL R+G+L D
Sbjct: 100 NSKKLMQRMASTYKDFHRIPGVDHNFDLDEEVLKRLGQLMD 140


>AF099918-1|AAK29840.2|  820|Caenorhabditis elegans Hypothetical
           protein H05C05.1a protein.
          Length = 820

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +1

Query: 64  YKTQ*SSKDESYKKRNVAPISRLQDTVHNSQSNSTGGFNKTNRAIVQFSNSPNWPHHEGN 243
           Y  Q SS  + Y   N  P+ R     HN   ++T  + +      Q+SN  ++ ++ G 
Sbjct: 214 YDRQNSSGRDDYHHGNGGPLQRSGSYQHNHNHSNTKDYGR------QYSNHNHYSNYHGG 267

Query: 244 GVFGP-DAQNRT-SH 282
           G  G   A++RT SH
Sbjct: 268 GGPGSISARSRTESH 282


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 323  FAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAY 436
            FA   +L+T+ K+P  PN+  +K +L+  +     + Y
Sbjct: 2602 FALWGMLRTIAKRPTDPNNKRKKVILLNCATPWRTIEY 2639


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 323  FAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAY 436
            FA   +L+T+ K+P  PN+  +K +L+  +     + Y
Sbjct: 2613 FALWGMLRTIAKRPTDPNNKRKKVILLNCATPWRTIEY 2650


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 323  FAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAY 436
            FA   +L+T+ K+P  PN+  +K +L+  +     + Y
Sbjct: 2613 FALWGMLRTIAKRPTDPNNKRKKVILLNCATPWRTIEY 2650


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 323  FAKGVVLKTVIKKPKKPNSANRKCVLVRLSNGKEMVAY 436
            FA   +L+T+ K+P  PN+  +K +L+  +     + Y
Sbjct: 2613 FALWGMLRTIAKRPTDPNNKRKKVILLNCATPWRTIEY 2650


>AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical
           protein W09G12.7 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 275 PHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRK 391
           P  KK+KS+ P       + V +K + K  KKP    R+
Sbjct: 189 PKKKKKKSKKPKKAPKSDEEVTIKIIKKPKKKPEDLERR 227


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
            K07G5.3 protein.
          Length = 1202

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +2

Query: 341  LKTVIKKPKKPNSANRKCVLVRLSNGKEMVAYIPGIGHNLQEHNVVLVRVGRLKDCP 511
            L+ +++ P+    ++ +  +VRL  G E+   I  + ++  E  V  V   RL+D P
Sbjct: 1113 LREILENPRGITESSVEERIVRLKEGYELTVIIIRVNYSSMEECVHEVLSNRLQDTP 1169


>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 425 MVAYIPGIGHNLQEHNVVLVR 487
           +VA +PG+G NLQ+H  + V+
Sbjct: 329 IVANLPGVGQNLQDHLEIYVQ 349


>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 425 FPCRLTILPERIYGSRS 375
           FPC+L +LP  +Y +R+
Sbjct: 944 FPCKLRVLPNHVYNTRN 960


>AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26a protein.
          Length = 515

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
 Frame = +1

Query: 7   IGICIKKS*YLAVK*LSIQYKTQ*S--SKDESYKKRNVAPISRLQDTVHNSQSNSTGGFN 180
           +G+C        +K  +++Y  Q    ++D S     + P+ RL + + +   N + GF 
Sbjct: 350 LGVCFCIVFLSLIKLAAVKYMRQRLLITRDTSIVAAGMLPMLRLVNGIGSPAVNGSEGFT 409

Query: 181 KTNRAIVQFSNSPN---WPHHEGNGVFGPDA-QNR 273
             N A+ + S SP+       E NG   P   QNR
Sbjct: 410 YENPAVKKVSMSPDTFTQVQMETNGSMSPVCRQNR 444


>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
            protein Y54F10BM.2 protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 425  FPCRLTILPERIYGSRS 375
            FPC+L +LP  +Y +R+
Sbjct: 1043 FPCKLRVLPNHVYNTRN 1059


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,812,169
Number of Sequences: 27780
Number of extensions: 323808
Number of successful extensions: 870
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)