Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_D09
         (369 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0657 + 16694833-16694963,16695567-16695684,16696280-166963...    26   8.1  

>05_03_0657 +
           16694833-16694963,16695567-16695684,16696280-16696376,
           16700126-16700232,16700473-16700595,16700791-16700944,
           16701237-16701297,16701417-16701781,16701875-16703483,
           16703697-16703940
          Length = 1002

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 65  DKFDSDESNAPATEGSTVDYGL*KKKINSYLFKLI 169
           DK DSD S  P  +GST    L K K  SY   ++
Sbjct: 535 DKNDSDTSKTPLPDGSTDSSSLSKTK-RSYRINIL 568


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,738,833
Number of Sequences: 37544
Number of extensions: 64154
Number of successful extensions: 200
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)