Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_D09
(369 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three par... 29 1.0
AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical ... 27 3.2
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 27 3.2
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 27 3.2
AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical ... 27 4.2
AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical ... 27 4.2
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 26 9.7
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z75712-2|CAB00041.1| 254|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical p... 26 9.7
U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical pr... 26 9.7
>AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three
paralog protein 3 protein.
Length = 739
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 17 ISKQSEPAKKKTVVPEDKFDSDESNAPATEGSTVDYGL*KKKIN 148
I+ + + K+ +PE+ D D + + E ST YG+ IN
Sbjct: 454 ITSPEKRNESKSAIPEEAADLDNTTSEKQESSTARYGVSNTSIN 497
>AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical
protein Y116A8B.1 protein.
Length = 207
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 111 DPSVAGAFDSSLSNLSSGTTVFFFAGSDCLLIRCFKQ 1
DP + AF++++ G F G+D ++ RCFK+
Sbjct: 142 DPHLPAAFENTILEAPFGVIAITFFGTD-MIWRCFKK 177
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 5 LKQRISKQSEPAKKKTVVPEDK 70
LK+++S++SEPA KK ED+
Sbjct: 76 LKRKLSEKSEPAAKKAKASEDQ 97
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 5 LKQRISKQSEPAKKKTVVPEDK 70
LK+++S++SEPA KK ED+
Sbjct: 123 LKRKLSEKSEPAAKKAKASEDQ 144
>AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical
protein Y39C12A.1 protein.
Length = 276
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 8 KQRISKQSEPAKKKTVVPEDKFDSDESNAPATEGST 115
K+R+ E KK V+ D FD+ + A +T+GS+
Sbjct: 179 KKRMLDVIERYKKTGVIRSDAFDAPQGTAMSTKGSS 214
>AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical
protein W02F12.3 protein.
Length = 388
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 29 SEPAKKKTVVPEDKFDSDESNAPATEG 109
SEP + PED D D+SN P+T G
Sbjct: 297 SEPQNRPPSRPED--DDDDSNKPSTSG 321
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 25.8 bits (54), Expect = 9.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +2
Query: 17 ISKQSEPAKKKTVVPEDKFDSDESNAPATEGS----TVDYGL*KKKINSYLFKLILMN 178
I + EP+ K P D SD NAP +E S +DYG + N++ K++ M+
Sbjct: 361 IPRSIEPSNSKPY-PSDSSWSDHDNAPGSEPSYIPDVLDYG---ARANNHAGKMMNMS 414
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 25.8 bits (54), Expect = 9.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +2
Query: 17 ISKQSEPAKKKTVVPEDKFDSDESNAPATEGS----TVDYGL*KKKINSYLFKLILMN 178
I + EP+ K P D SD NAP +E S +DYG + N++ K++ M+
Sbjct: 686 IPRSIEPSNSKPY-PSDSSWSDHDNAPGSEPSYIPDVLDYG---ARANNHAGKMMNMS 739
>Z75712-2|CAB00041.1| 254|Caenorhabditis elegans Hypothetical
protein K04G2.4 protein.
Length = 254
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 8 KQRISKQSEPAKKKTVVPEDKFDSDESNAPATEGSTVDYGL 130
KQ+ ++++PA+K E K D++ P G V + L
Sbjct: 156 KQKSPEKAKPARKVDNTDEKKRKKDQNEKPVINGPNVRHQL 196
>Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical
protein B0035.11 protein.
Length = 430
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 23 KQSEPAKKKTVVPEDKFDSDESNAP 97
K+ EP+KK+ ++ E D D AP
Sbjct: 33 KKQEPSKKRAILNESDDDDDSRPAP 57
>U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical
protein C01F1.1 protein.
Length = 481
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 8 KQRISKQSEPAKKKTVVPEDKFD--SDESNAPATEGSTVDY 124
K++ K ++PAK+K EDK D ES+ EG DY
Sbjct: 238 KKKKKKNAKPAKEKRQRVEDKDDVAKYESSDGEDEGREYDY 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,735,970
Number of Sequences: 27780
Number of extensions: 75231
Number of successful extensions: 289
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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