Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_D08
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   6.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 208 KPVSTRFLRISQPMPPAP 155
           +P + R + ISQP PP P
Sbjct: 96  EPGNNRPVYISQPRPPHP 113



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 208 KPVSTRFLRISQPMPPAP 155
           +P + R + ISQP PP P
Sbjct: 152 EPGNNRPVYISQPRPPHP 169



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 208 KPVSTRFLRISQPMPPAP 155
           KP + R + I QP PP P
Sbjct: 264 KPGNNRPVYIPQPRPPHP 281


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 5/15 (33%), Positives = 13/15 (86%)
 Frame = -1

Query: 455 VTGNTIVQCIHHNVE 411
           +T + +++C+HH++E
Sbjct: 142 LTKSRLMRCLHHDIE 156


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 369 SVISNDYGVKYFKQFN 416
           SVI  + GV YF Q N
Sbjct: 302 SVIDTNTGVDYFTQIN 317


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 172 PMPPAPTTSNL 140
           PMPP P  SN+
Sbjct: 416 PMPPIPNMSNM 426


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,023
Number of Sequences: 438
Number of extensions: 3858
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)