Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_D06
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.0
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 3.4
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 294 RGGRDTNRYALKFYRETEDELKIKKEDALRALSPVPEKEMEINSLDYFP-VDLSFPRRPP 470
RG D ++ L+ +T D+LKIK L VPE S D P V LS P R P
Sbjct: 95 RGEIDVSQAELQSLLKTADQLKIK------GLCEVPE------SRDGPPSVSLSSPPREP 142
Query: 471 WDFNMTAAQLDAQEHRY 521
+ +L RY
Sbjct: 143 GTPRINFTKLKRHHPRY 159
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNEIDLRSRTKEERLQHRRE 41
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 178 RPKNNSCSLRSRTRFYLCLHRQE 246
R ++N LRSRT+ HR+E
Sbjct: 19 RNEDNKIDLRSRTKEERLQHRRE 41
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 526 LKYLCSCASNCAAVILKS 473
++ + SCAS C AV KS
Sbjct: 1705 MRPVVSCASGCTAVETKS 1722
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,756
Number of Sequences: 438
Number of extensions: 3130
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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