Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_D01
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 110 7e-25
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 110 7e-25
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 99 3e-21
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 81 9e-16
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 81 9e-16
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 81 9e-16
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 81 9e-16
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 81 9e-16
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 54 1e-07
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 52 4e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 49 3e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 49 3e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 49 3e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 49 3e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 49 3e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 49 3e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 47 1e-05
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 47 1e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 1e-05
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 47 1e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 3e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 45 4e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 43 2e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 43 2e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 43 2e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 43 2e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 43 2e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.001
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 40 0.002
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 40 0.002
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 39 0.003
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 39 0.004
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 39 0.004
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 37 0.011
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 37 0.011
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 37 0.011
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 37 0.014
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.058
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 35 0.058
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 34 0.076
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.076
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.076
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.076
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.076
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.23
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.23
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.23
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 33 0.23
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.23
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 32 0.41
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 32 0.41
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 32 0.41
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.71
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 0.71
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.71
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.71
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.2
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 2.2
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 2.2
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 29 3.8
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 3.8
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 6.6
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 27 8.7
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 27 8.7
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 27 8.7
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 27 8.7
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 110 bits (265), Expect = 7e-25
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +1
Query: 268 ADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 447
+ HF YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK
Sbjct: 46 SSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAK 105
Query: 448 ARHG-KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVN 624
+R K+FVGGL S+ S+ ++R+ F +FG + +E PFD R+ F FI FE E+ +
Sbjct: 106 SRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESAD 165
Query: 625 DLLKTPKRT 651
K+T
Sbjct: 166 KASSQTKQT 174
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +1
Query: 274 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 453
HF +G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA
Sbjct: 129 HFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VP 187
Query: 454 HGKIFVG 474
GK F G
Sbjct: 188 QGKRFPG 194
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/48 (33%), Positives = 33/48 (68%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
KIFVGG+S E++++++ + F+++G + ++ +D T +GF F+ F
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 110 bits (265), Expect = 7e-25
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +1
Query: 268 ADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 447
+ HF YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK
Sbjct: 46 SSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAK 105
Query: 448 ARHG-KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVN 624
+R K+FVGGL S+ S+ ++R+ F +FG + +E PFD R+ F FI FE E+ +
Sbjct: 106 SRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESAD 165
Query: 625 DLLKTPKRT 651
K+T
Sbjct: 166 KASSQTKQT 174
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +1
Query: 274 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 453
HF +G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA
Sbjct: 129 HFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VP 187
Query: 454 HGKIFVG 474
GK F G
Sbjct: 188 QGKRFPG 194
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/48 (33%), Positives = 33/48 (68%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
KIFVGG+S E++++++ + F+++G + ++ +D T +GF F+ F
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---- 438
D+FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 63 DYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFP 122
Query: 439 -----KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
K + K+F+GGLS+ + ++++ +F +G + + FD +GF F+TF
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Query: 604 ESEQVVN 624
+S++V +
Sbjct: 183 DSDEVAD 189
Score = 51.2 bits (117), Expect = 6e-07
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = +1
Query: 214 TENFLLVG*AGRPQIRSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 393
T+ + G + + +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Query: 394 AAGEHTINNKKVDPKKAKAR 453
H IN K V+ KKA+ +
Sbjct: 193 EIHFHEINGKMVECKKAQPK 212
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 403 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRK 582
E +N D GK+F+GGLS + + + +R++F FG + + D +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 583 GFCFITFESEQVVNDLL 633
GF FITF V+ +L
Sbjct: 87 GFGFITFVDPSSVDKVL 103
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 201 GRDDDRKLFVGGLSWETTDKELR 269
G D K+F+GGLSW+TT + LR
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLR 62
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---- 438
D+FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 63 DYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFP 122
Query: 439 -----KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
K + K+F+GGLS+ + ++++ +F +G + + FD +GF F+TF
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Query: 604 ESEQVVN 624
+S++V +
Sbjct: 183 DSDEVAD 189
Score = 51.2 bits (117), Expect = 6e-07
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = +1
Query: 214 TENFLLVG*AGRPQIRSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 393
T+ + G + + +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Query: 394 AAGEHTINNKKVDPKKAKAR 453
H IN K V+ KKA+ +
Sbjct: 193 EIHFHEINGKMVECKKAQPK 212
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 403 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRK 582
E +N D GK+F+GGLS + + + +R++F FG + + D +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 583 GFCFITFESEQVVNDLL 633
GF FITF V+ +L
Sbjct: 87 GFGFITFVDPSSVDKVL 103
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 201 GRDDDRKLFVGGLSWETTDKELR 269
G D K+F+GGLSW+TT + LR
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLR 62
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 80.6 bits (190), Expect = 9e-16
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 41 EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVP 100
Query: 451 RHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFI 597
R K ++V G+ + ++D + +F+++GT+ E+ D +GF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 598 TFESEQVVN 624
TF+ V+
Sbjct: 161 TFDDHDSVD 169
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
KIFVGGL+S +DD +R F+S+FG I + + D T +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F YG + + D T + RGF F+ F +S+D+ + H +N + D +K +
Sbjct: 132 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLS 191
Query: 451 R 453
+
Sbjct: 192 K 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 80.6 bits (190), Expect = 9e-16
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 3 EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVP 62
Query: 451 RHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFI 597
R K ++V G+ + ++D + +F+++GT+ E+ D +GF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 598 TFESEQVVN 624
TF+ V+
Sbjct: 123 TFDDHDSVD 131
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F YG + + D T + RGF F+ F +S+D+ + H +N + D +K +
Sbjct: 94 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLS 153
Query: 451 R 453
+
Sbjct: 154 K 154
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 505 IRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
+R F+S+FG I + + D T +GF F+TF + V+ +K
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 80.6 bits (190), Expect = 9e-16
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 3 EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVP 62
Query: 451 RHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFI 597
R K ++V G+ + ++D + +F+++GT+ E+ D +GF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 598 TFESEQVVN 624
TF+ V+
Sbjct: 123 TFDDHDSVD 131
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F YG + + D T + RGF F+ F +S+D+ + H +N + D +K +
Sbjct: 94 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLS 153
Query: 451 R 453
+
Sbjct: 154 K 154
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 505 IRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
+R F+S+FG I + + D T +GF F+TF + V+ +K
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 80.6 bits (190), Expect = 9e-16
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 41 EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVP 100
Query: 451 RHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFI 597
R K ++V G+ + ++D + +F+++GT+ E+ D +GF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 598 TFESEQVVN 624
TF+ V+
Sbjct: 161 TFDDHDSVD 169
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
KIFVGGL+S +DD +R F+S+FG I + + D T +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F YG + + D T + RGF F+ F +S+D+ + H +N + D +K +
Sbjct: 132 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLS 191
Query: 451 R 453
+
Sbjct: 192 K 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 80.6 bits (190), Expect = 9e-16
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 41 EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVP 100
Query: 451 RHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFI 597
R K ++V G+ + ++D + +F+++GT+ E+ D +GF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 598 TFESEQVVN 624
TF+ V+
Sbjct: 161 TFDDHDSVD 169
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
KIFVGGL+S +DD +R F+S+FG I + + D T +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F YG + + D T + RGF F+ F +S+D+ + H +N + D +K +
Sbjct: 132 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLS 191
Query: 451 R 453
+
Sbjct: 192 K 192
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV------ 429
+ F A G + SI V D T S G+A++ F+ P ++ M ++ K +
Sbjct: 50 EKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
Query: 430 -DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFE 606
DP ++ G IF+ L I + I + FS FG IL ++ D KG+ F+ FE
Sbjct: 110 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE 168
Query: 607 SEQVVNDLLK 636
+E+ + ++
Sbjct: 169 TEEAAQNAIQ 178
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 375
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 35.1 bits (77), Expect = 0.044
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 26/139 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 417
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 418 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 559 DXTXNXRKGFCFITFESEQ 615
D KGF F+ FE +
Sbjct: 351 DEN-GRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV------ 429
+ F A G + SI V D T S G+A++ F+ P ++ M ++ K +
Sbjct: 50 EKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
Query: 430 -DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFE 606
DP ++ G IF+ L I + I + FS FG IL ++ D KG+ F+ FE
Sbjct: 110 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE 168
Query: 607 SEQVVNDLLK 636
+E+ + ++
Sbjct: 169 TEEAAQNAIQ 178
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 375
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 337 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 35.1 bits (77), Expect = 0.044
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 26/139 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 417
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 418 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 559 DXTXNXRKGFCFITFESEQ 615
D KGF F+ FE +
Sbjct: 351 DEN-GRSKGFGFVCFEKPE 368
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 52.0 bits (119), Expect = 4e-07
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Frame = +1
Query: 289 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 456
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 96
Query: 457 ---GKIFVGGLSSEISDDEIRNFFSEFGTILXV-EMPFDXTXNXRKGFCFITFESEQVVN 624
IFVG L E+ + + + FS FG IL V ++ D KGF FI F S + +
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 156
Query: 625 DLLK 636
L+
Sbjct: 157 TALE 160
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
I+VGGL ++S+ + + G ++ V MP D +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 271 DHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 399
D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 118 DTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 52.0 bits (119), Expect = 4e-07
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Frame = +1
Query: 289 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 456
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 106
Query: 457 ---GKIFVGGLSSEISDDEIRNFFSEFGTILXV-EMPFDXTXNXRKGFCFITFESEQVVN 624
IFVG L E+ + + + FS FG IL V ++ D KGF FI F S + +
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 166
Query: 625 DLLK 636
L+
Sbjct: 167 TALE 170
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
I+VGGL ++S+ + + G ++ V MP D +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 82
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 271 DHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 399
D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 128 DTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV------ 429
+ F G + SI V D + S G+A++ F+ P ++ + I+ + +
Sbjct: 75 EKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQ 134
Query: 430 -DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFE 606
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE
Sbjct: 135 RDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFE 193
Query: 607 SE 612
+E
Sbjct: 194 TE 195
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Frame = +1
Query: 259 RSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINN 420
+S D F +G I S V TD + G S+G+ F+ F+ S I+KV M + +
Sbjct: 159 KSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Query: 421 KKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNX 576
K P+ + + + +FV + +++ FS+FG I + D
Sbjct: 218 GKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGK 276
Query: 577 RKGFCFITFESEQVVNDLLK 636
KGF F+ F + ++
Sbjct: 277 PKGFGFVAFADQDAAGQAVE 296
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 375
DHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 361 DHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI-DKVMAAGEHTINNKKVD 432
F +GEI S V TD G+ +GF F+ F +A E + D ++ + ++ +
Sbjct: 258 FSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQ 316
Query: 433 PKKAKARHGK------------------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
K ++ K ++V + +++DD +R+ FS FGTI ++
Sbjct: 317 KKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMV 376
Query: 559 DXTXNXRKGFCFITFESEQ 615
D KGF F+ FE +
Sbjct: 377 DEN-GRSKGFGFVCFEKPE 394
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV------ 429
+ F G + SI V D + S G+A++ F+ P ++ + I+ + +
Sbjct: 75 EKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQ 134
Query: 430 -DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFE 606
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE
Sbjct: 135 RDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFE 193
Query: 607 SE 612
+E
Sbjct: 194 TE 195
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Frame = +1
Query: 259 RSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINN 420
+S D F +G I S V TD + G S+G+ F+ F+ S I+KV M + +
Sbjct: 159 KSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Query: 421 KKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNX 576
K P+ + + + +FV + +++ FS+FG I + D
Sbjct: 218 GKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGK 276
Query: 577 RKGFCFITFESEQVVNDLLK 636
KGF F+ F + ++
Sbjct: 277 PKGFGFVAFADQDAAGQAVE 296
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 375
DHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 361 DHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI-DKVMAAGEHTINNKKVD 432
F +GEI S V TD G+ +GF F+ F +A E + D ++ + ++ +
Sbjct: 258 FSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQ 316
Query: 433 PKKAKARHGK------------------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
K ++ K ++V + +++DD +R+ FS FGTI ++
Sbjct: 317 KKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMV 376
Query: 559 DXTXNXRKGFCFITFESEQ 615
D KGF F+ FE +
Sbjct: 377 DEN-GRSKGFGFVCFEKPE 394
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKVD-----PK 438
F + GEIES + D TG+S G+ F+ + + +++ V + + NK + P
Sbjct: 62 FTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPS 121
Query: 439 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQV 618
+ + ++V G+ ++ E+ + F FG I+ + D KG F+ F+ +
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDE 181
Query: 619 VNDLLKT 639
+ +KT
Sbjct: 182 ADVAIKT 188
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES 609
+FV LSS+ D + FS+FG I+ V++ D T KG+ F++ +
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQC-KGYAFVSMSN 423
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 259 RSSADH-FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 432
+S +H F YG I+S+N+ DP+TG RGFA I F + + +K + H I+ +VD
Sbjct: 38 KSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +1
Query: 409 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGF 588
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 589 CFITFESEQVVNDLLK 636
ITF+S+ N ++
Sbjct: 69 ASITFDSKDGANKAIE 84
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 429
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
D + R K+F+G LS + +++ +R F++FG I + D R G F+TF
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 415 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCF 594
N+ P + K+FVG + + ++ + R F ++G++ + D + KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 595 ITF 603
+TF
Sbjct: 101 VTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 429
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
D + R K+F+G LS + +++ +R F++FG I + D R G F+TF
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 415 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCF 594
N+ P + K+FVG + + ++ + R F ++G++ + D + KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 595 ITF 603
+TF
Sbjct: 101 VTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 429
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
D + R K+F+G LS + +++ +R F++FG I + D R G F+TF
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 415 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCF 594
N+ P + K+FVG + + ++ + R F ++G++ + D + KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 595 ITF 603
+TF
Sbjct: 101 VTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 429
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
D + R K+F+G LS + +++ +R F++FG I + D R G F+TF
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 415 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCF 594
N+ P + K+FVG + + ++ + R F ++G++ + D + KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 595 ITF 603
+TF
Sbjct: 101 VTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 429
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
D + R K+F+G LS + +++ +R F++FG I + D R G F+TF
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 415 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCF 594
N+ P + K+FVG + + ++ + R F ++G++ + D + KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 595 ITF 603
+TF
Sbjct: 101 VTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 429
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
D + R K+F+G LS + +++ +R F++FG I + D R G F+TF
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 415 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCF 594
N+ P + K+FVG + + ++ + R F ++G++ + D + KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 595 ITF 603
+TF
Sbjct: 101 VTF 103
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Frame = +1
Query: 352 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 513
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 514 FFS-EFGTILXVEMPFDXTXNXRKGFCFITFESEQVVN 624
FFS + G + V + D KGF F+ F+ + V+
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 289 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 447
G +E++ + D +TG+ +GFAF+ FK S+ +A TI +K D + K
Sbjct: 271 GPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLRITK 321
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEM 552
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 454 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLL 633
H +F+GGL ++ +EI FSEFG +L V + D KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 634 K 636
+
Sbjct: 378 E 378
Score = 41.1 bits (92), Expect = 7e-04
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +1
Query: 274 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 453
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 454 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXR--------KGFCFITFES 609
K+FVGG+S ++ I FF +FGT+ V+ P N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 610 EQVVNDLLKTPKR 648
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 454 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLL 633
H +F+GGL ++ +EI FSEFG +L V + D KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 634 K 636
+
Sbjct: 378 E 378
Score = 41.1 bits (92), Expect = 7e-04
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +1
Query: 274 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 453
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 454 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXR--------KGFCFITFES 609
K+FVGG+S ++ I FF +FGT+ V+ P N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 610 EQVVNDLLKTPKR 648
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 454 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLL 633
H +F+GGL ++ +EI FSEFG +L V + D KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 634 K 636
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 454 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLL 633
H +F+GGL ++ +EI FSEFG +L V + D KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 634 K 636
+
Sbjct: 378 E 378
Score = 41.1 bits (92), Expect = 7e-04
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +1
Query: 274 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 453
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 454 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXR--------KGFCFITFES 609
K+FVGG+S ++ I FF +FGT+ V+ P N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 610 EQVVNDLLKTPKR 648
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES----EQVVND 627
K+F+GGLS + +D+++ N+FS++G ++ + D +GF F+TF S E +ND
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F +G + V DPNT SRGF F+ F + S + M H + K VD K+A
Sbjct: 67 NYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIP 126
Query: 451 RHG------------------KIFVGGLSSEI-SDDEIRNFFSEFGTILXVEMPFDXTXN 573
R K+ + G+++ + S D +R +F FGT+ VE+
Sbjct: 127 REQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEI-----LG 181
Query: 574 XRKGFCFITFESEQ 615
+G F+ +E ++
Sbjct: 182 QPRGLGFVIYEDKE 195
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 216 RKLFVGGLSWETTDKEL 266
RKLF+GGLS +TTD++L
Sbjct: 49 RKLFIGGLSHDTTDEQL 65
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES----EQVVND 627
K+F+GGLS + +D+++ N+FS++G ++ + D +GF F+TF S E +ND
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F +G + V DPNT SRGF F+ F + S + M H + K VD K+A
Sbjct: 87 NYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIP 146
Query: 451 RHG------------------KIFVGGLSSEI-SDDEIRNFFSEFGTILXVEMPFDXTXN 573
R K+ + G+++ + S D +R +F FGT+ VE+
Sbjct: 147 REQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEI-----LG 201
Query: 574 XRKGFCFITFESEQ 615
+G F+ +E ++
Sbjct: 202 QPRGLGFVIYEDKE 215
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 216 RKLFVGGLSWETTDKEL 266
RKLF+GGLS +TTD++L
Sbjct: 69 RKLFIGGLSHDTTDEQL 85
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES----EQVVND 627
K+F+GGLS + +D+++ N+FS++G ++ + D +GF F+TF S E +ND
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA 450
++F +G + V DPNT SRGF F+ F + S + M H + K VD K+A
Sbjct: 88 NYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIP 147
Query: 451 RHG------------------KIFVGGLSSEI-SDDEIRNFFSEFGTILXVEMPFDXTXN 573
R K+ + G+++ + S D +R +F FGT+ VE+
Sbjct: 148 REQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEI-----LG 202
Query: 574 XRKGFCFITFESEQ 615
+G F+ +E ++
Sbjct: 203 QPRGLGFVIYEDKE 216
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 216 RKLFVGGLSWETTDKEL 266
RKLF+GGLS +TTD++L
Sbjct: 70 RKLFIGGLSHDTTDEQL 86
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
+FVG +S ++S+D IR+ FS+ G +L ++M D KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKV 429
F YG + S N+ D +T S+G F+ F ++I+ KV+ H + K
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPA 134
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 537
D + R K+F+G LS + +++ +R F++FG I
Sbjct: 135 DTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +1
Query: 415 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCF 594
N+ P + K+FVG + + ++ + R F ++G++ + D + KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 595 ITF 603
+TF
Sbjct: 101 VTF 103
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/70 (24%), Positives = 42/70 (60%)
Frame = +1
Query: 406 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKG 585
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + ++ D KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 586 FCFITFESEQ 615
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
Score = 34.7 bits (76), Expect = 0.058
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI-------- 414
F +GE+ V D T +S+G+ F+ F ++ + +A G+ +
Sbjct: 155 FTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARK 214
Query: 415 NNKKVDPK--------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEM 552
N+++ K KA + ++VG +S + +D ++R+ FS +G I V +
Sbjct: 215 NSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK- 636
+IFVGG + ++ E+R F +F + V+M KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 637 TPKR 648
TPK+
Sbjct: 126 TPKQ 129
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKAR 453
F G+I + + DP +G SRG+AF+ + E + H I+ K
Sbjct: 220 FEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIA 279
Query: 454 HGKIFVGGLSSEISDDEI----RNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVV 621
+ ++F+G + S DEI + ++ +P D +GFCF+ F +
Sbjct: 280 NTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTA 338
Query: 622 NDL 630
+D+
Sbjct: 339 SDI 341
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESIDKVMAAGEH--------- 408
F +G I+SIN+ DP TG + FAF+ ++ P ES++ M G +
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQ 181
Query: 409 ----TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFD 561
N + P +K ++ +++V + ++S+ ++++ F FG I+ ++
Sbjct: 182 EMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARA 241
Query: 562 XTXNXRKGFCFITFES 609
T +GF ++ F +
Sbjct: 242 PTGRGHRGFGYLEFNN 257
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESIDKVMAAGEH--------- 408
F +G I+SIN+ DP TG + FAF+ ++ P ES++ M G +
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQ 181
Query: 409 ----TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFD 561
N + P +K ++ +++V + ++S+ ++++ F FG I+ ++
Sbjct: 182 EMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARA 241
Query: 562 XTXNXRKGFCFITFES 609
T +GF ++ F +
Sbjct: 242 PTGRGHRGFGYLEFNN 257
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESIDKVMAAGEH--------- 408
F +G I+SIN+ DP TG + FAF+ ++ P ES++ M G +
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQ 181
Query: 409 ----TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFD 561
N + P +K ++ +++V + ++S+ ++++ F FG I+ ++
Sbjct: 182 EMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARA 241
Query: 562 XTXNXRKGFCFITFES 609
T +GF ++ F +
Sbjct: 242 PTGRGHRGFGYLEFNN 257
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK- 636
+IFVGG + ++ E+R F +F + V+M KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 637 TPKR 648
TPK+
Sbjct: 127 TPKQ 130
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 274 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 453
+F G + +K + G S+GF F+ + +KV+A +H I+ ++ D K R
Sbjct: 192 YFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGR 250
Query: 454 H-------GKIFVGGLSSEISDDEIRNFF-SEFGTILXVEMPFD-XTXNXRKGFCFITFE 606
+IFVG L+ ++ + ++R F E + + + D +GF F+T
Sbjct: 251 DKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLS 310
Query: 607 SEQVVNDLL 633
S + ++
Sbjct: 311 SAEAAERIV 319
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 340 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 453
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 456
F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A N + + + H
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDH 113
Query: 457 GKIFVGGLSSEISDDEIRNFFSE 525
+ + E +DDE + + E
Sbjct: 114 VEEYKVPKYKEDADDETKRLWEE 136
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
I++GGLS +S+ ++ FS++G ++ + + D KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 436 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
K +RH +FVG L SEI ++R F +FG + ++ D N KG+ F+++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 406 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXR 579
H + K D +A A + ++VG +++ + +DEIR F FG I V F
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR-TFKI----- 289
Query: 580 KGFCFITFESEQ 615
+G+ F+ FE+++
Sbjct: 290 QGYAFVKFETKE 301
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 469 VGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES 609
V L E+++DE+R+ F + G ++ + + D KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 396
D FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 194 DLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 451 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
RH +FVG LSSE+ + ++R F FG + ++ D KG+ F+++ +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
Score = 32.3 bits (70), Expect = 0.31
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI-------- 414
F +G++ V D NT +S+G+ F+ + E ++ + G TI
Sbjct: 42 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101
Query: 415 ----------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
N K D + + ++VG ++S +++DEIR F+ FG I V +
Sbjct: 102 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-- 158
Query: 559 DXTXNXRKGFCFITFESE 612
+G+ F+ F+++
Sbjct: 159 ----FKMQGYAFVKFDNK 172
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 451 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
RH +FVG LSSE+ + ++R F FG + ++ D KG+ F+++ +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
Score = 32.3 bits (70), Expect = 0.31
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI-------- 414
F +G++ V D NT +S+G+ F+ + E ++ + G TI
Sbjct: 52 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Query: 415 ----------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
N K D + + ++VG ++S +++DEIR F+ FG I V +
Sbjct: 112 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-- 168
Query: 559 DXTXNXRKGFCFITFESE 612
+G+ F+ F+++
Sbjct: 169 ----FKMQGYAFVKFDNK 182
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 451 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
RH +FVG LSSE+ + ++R F FG + ++ D KG+ F+++ +
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187
Score = 32.3 bits (70), Expect = 0.31
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI-------- 414
F +G++ V D NT +S+G+ F+ + E ++ + G TI
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Query: 415 ----------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
N K D + + ++VG ++S +++DEIR F+ FG I V +
Sbjct: 215 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-- 271
Query: 559 DXTXNXRKGFCFITFESE 612
+G+ F+ F+++
Sbjct: 272 ----FKMQGYAFVKFDNK 285
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 451 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
RH +FVG LSSE+ + ++R F FG + ++ D KG+ F+++ +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Score = 32.3 bits (70), Expect = 0.31
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI-------- 414
F +G++ V D NT +S+G+ F+ + E ++ + G TI
Sbjct: 123 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
Query: 415 ----------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
N K D + + ++VG ++S +++DEIR F+ FG I V +
Sbjct: 183 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-- 239
Query: 559 DXTXNXRKGFCFITFESE 612
+G+ F+ F+++
Sbjct: 240 ----FKMQGYAFVKFDNK 253
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLL 633
+FV + E ++D++ + FSE+G I + + D KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVD 432
D F YG+I++I++ D TG +G+A + ++ + ++ + T N KVD
Sbjct: 73 DKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 430 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES 609
DP ++ G IF+ L I + I + FS FG IL ++ D KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFET 106
Query: 610 EQVVNDLLK 636
E+ + ++
Sbjct: 107 EEAAQNAIQ 115
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 375
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 274 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 35.1 bits (77), Expect = 0.044
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 26/139 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 417
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 418 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 559 DXTXNXRKGFCFITFESEQ 615
D KGF F+ FE +
Sbjct: 288 DEN-GRSKGFGFVCFEKPE 305
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 456
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 457 GK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 549
GK +FVGGL S + ++ F EFG + ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES 609
+FVG + S++ + EIR+ F E G + E+ N + F+ F++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKV--EEVDIKTPINTDAAYAFVMFQT 217
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 456
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 244
Query: 457 GK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 549
GK +FVGGL S + ++ F EFG + ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES 609
+FVG + S++ + EIR+ F E G + E+ N + F+ F++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKV--EEVDIKTPINTDAAYAFVMFQT 217
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 456
F +G++E +++KT NT + +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGY 221
Query: 457 GK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 549
GK +FVGGL S + ++ F EFG + ++
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFES 609
+FVG + S++ + EIR+ F E G + E+ N + F+ F++
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKV--EEVDIKTPINTDAAYAFVMFQT 194
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Frame = +1
Query: 259 RSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 438
R + F A G + + + TD TGRS+G ++ F ES+ +A + + +
Sbjct: 39 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQ 98
Query: 439 KAKARHGK----------------------IFVGGLSSEISDDEIRNFFSEFGTILXVEM 552
+ A + + V L +I + IR+ F FG I +++
Sbjct: 99 RTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDL 158
Query: 553 PFDXTXNXRKGFCFITFES 609
D R GF ITF +
Sbjct: 159 EVDSNRENR-GFATITFRN 176
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/68 (20%), Positives = 29/68 (42%)
Frame = +1
Query: 418 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFI 597
N K++ + + + ++ + ++ FFS G + V + D KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 598 TFESEQVV 621
F E+ V
Sbjct: 72 EFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Frame = +1
Query: 259 RSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 438
R + F A G + + + TD TGRS+G ++ F ES+ +A + + +
Sbjct: 184 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQ 243
Query: 439 KAKARHGK----------------------IFVGGLSSEISDDEIRNFFSEFGTILXVEM 552
+ A + + V L +I + IR+ F FG I +++
Sbjct: 244 RTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDL 303
Query: 553 PFDXTXNXRKGFCFITFES 609
D R GF ITF +
Sbjct: 304 EVDSNRENR-GFATITFRN 321
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/68 (20%), Positives = 29/68 (42%)
Frame = +1
Query: 418 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFI 597
N K++ + + + ++ + ++ FFS G + V + D KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 598 TFESEQVV 621
F E+ V
Sbjct: 217 EFWDEESV 224
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 375
F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 277 FESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 35.1 bits (77), Expect = 0.044
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 26/139 (18%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 417
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 418 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 558
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 559 DXTXNXRKGFCFITFESEQ 615
D KGF F+ FE +
Sbjct: 291 DEN-GRSKGFGFVCFEKPE 308
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Frame = +1
Query: 340 RGFAFIVFKAPESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLS 483
RGFA++V + + + + + + + DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVH 691
Query: 484 SEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESE 612
+ +DDE++ FS+FGT+ V KG F+ F++E
Sbjct: 692 FQATDDELKALFSKFGTVTSVRR-VTHKDGKPKGIAFVDFDTE 733
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 195 APGRDDDRKLFVGGLSWETTDKELR 269
APG +D R +FV L + TT+ E+R
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIR 610
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLKT 639
KIFVGGL SD + +F +FG I + D +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 640 P 642
P
Sbjct: 96 P 96
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = +1
Query: 187 VLRPQDAMTTENFLLVG*AGRPQIRSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 366
V+ +D M T+ F+ G ++ ++F +G+IE V TD NT +SRG+ F+ K
Sbjct: 26 VVGSRDTMFTKIFV-GGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMK 84
Query: 367 APESIDKVMAAGEHTINNKKVD 432
S ++ I+ +K +
Sbjct: 85 DRASAERACKDPNPIIDGRKAN 106
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 274 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVDPKK 441
HF G + + ++ D +G +GFA++ F E + +A + + + KVDPK+
Sbjct: 97 HFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 436 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF-ESE 612
+KA+A ++VG + + +EI F G++ V + D KGF ++ F E E
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 613 QVVNDLLKT 639
+ N L T
Sbjct: 131 GMQNALAMT 139
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
+++ GL +DD +R S++G I + D N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
+++ GL +DD +R S++G I + D N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESE 612
++VG + +++E+ NFFS G I V + D +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 393
F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 25 FSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.1 bits (82), Expect = 0.011
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 408
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 409 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGF 588
+++ PK K K+F+G LS + S+DE+R F+ FG + V + KG
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGC 166
Query: 589 CFITFE 606
F+ ++
Sbjct: 167 AFVKYK 172
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
K+FVG + + + ++R+ F +FG I + D KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 177 DHNSAEAPGRDDDRKLFVGGLSWETTDKELR 269
D A + DD+KLF+G LS + ++ E+R
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESE 612
++VG + ++D++ N+FS+ G + V + D +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVF 363
++F G + ++ + D TGR RGFAF+ F
Sbjct: 22 NYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.1 bits (82), Expect = 0.011
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEH 408
F +G+I + D TG +G AF+ + K +++ M
Sbjct: 49 FEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPA 108
Query: 409 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGF 588
+++ PK K K+F+G LS + S+DE+R F+ FG + V + KG
Sbjct: 109 DTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGC 166
Query: 589 CFITFE 606
F+ ++
Sbjct: 167 AFVKYK 172
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
K+FVG + + + ++R+ F +FG I + D KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 177 DHNSAEAPGRDDDRKLFVGGLSWETTDKELR 269
D A + DD+KLF+G LS + ++ E+R
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +1
Query: 451 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFE 606
R ++VGG + ++++ + F FG ++ + +P D +GF F+ F+
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 429
+HF G++ + + D TG + FAF+ F+ ES+ + N+K+
Sbjct: 64 EHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKI 116
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESE 612
++VG + + +++EI N+F+ G + V + +D +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
Score = 35.1 bits (77), Expect = 0.044
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVF 363
++F A G + ++ + D TGR RGFAF+ F
Sbjct: 24 NYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 378
F YGE+ + V D TG +GFA + F PE+
Sbjct: 299 FKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 426
F YG+I ++K G+ RGFAF+ F S +A T N K
Sbjct: 23 FEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKSNQTFFNSK 71
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMP 555
K+FVGGL S + + +I NFFS +G L V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 271 DHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 375
D FG +GEI ++ D +G SRGF FI F E
Sbjct: 94 DVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 469 VGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
V LSS ++ ++R+ F EFG I ++ +D +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.3 bits (75), Expect = 0.076
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.3 bits (75), Expect = 0.076
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.3 bits (75), Expect = 0.076
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.3 bits (75), Expect = 0.076
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF 603
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEY 316
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 463 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQ 615
++VG LS +D++ F G + V M D GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR 453
F AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 454 HGKI 465
K+
Sbjct: 129 RRKL 132
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITF-ESEQVV 621
++F G L +E+SD+ + F ++ + ++ + N KG+ F++F +SE V
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYV 258
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF-DXTXNXRKGFCFITFESEQVVNDLL 633
+++VGG S+ +S ++IRN ++ V + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR 453
F AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 71 FFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPT 128
Query: 454 HGKI 465
K+
Sbjct: 129 RRKL 132
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
K++VGGL S+ + E+ F FG I V GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-----WVARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
K++VGGL S+ + E+ F FG I V GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-----WVARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVNDLLK 636
K++VGGL S+ + E+ F FG I V GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-----WVARRPPGFAFVEYDDVRDAEDAVR 57
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVND 627
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAED 51
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVND 627
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAED 51
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVND 627
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAED 51
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 388 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 540
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 280 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG----EHTINNKKVDPK 438
G YG++ + + DP +G A + F ++ + ++ H NNK+V+ K
Sbjct: 387 GHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVEIK 443
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 433 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 537
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 433 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 537
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 433 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 537
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVVND 627
++++G L + SD ++ +FF +G + V M + GF F+ F+ ++ +D
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADD 50
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 183 NSAEAPGRDDD--RKLFVGGLSWETTDKELR*SF 278
N AE P +D R LFVG +++ET++ +LR F
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREF 124
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 216 RKLFVGGLSWETTDKELR*SF 278
RK+FVGG+ W+ T+ L+ SF
Sbjct: 295 RKIFVGGVPWDITEAALKDSF 315
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMP 555
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 256 IRSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 393
I +HF G+I + D T + + FA+I F SI+ +
Sbjct: 68 IEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 286 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 465
+ + SI+ T+ + + E K+ E+ + ++ + K +H +
Sbjct: 54 FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112
Query: 466 FVGGLSSEISDDEIRNFFSEFGTILXVEM----PFDXTXNXRKGFCFITFESEQ 615
++ G S++ D+I + ++FG V M P D T KG FIT+++ +
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTF---KGSVFITYKTRE 163
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/41 (21%), Positives = 23/41 (56%)
Frame = +1
Query: 496 DDEIRNFFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQV 618
+ E+ +F +FG +L + + + KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = +1
Query: 460 KIFVGGLSSEISDDEIRN------FFSEFGTILXVEMPFDXTXNXRKGFCFITFESEQVV 621
K F+GGL + +I F E + + D KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 622 N 624
N
Sbjct: 67 N 67
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 337 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 456
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 400 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 537
G+HT + + K +FVG +S + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 400 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 537
G+HT + + K +FVG +S + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 256 IRSSADHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 393
I +HF G I + D T + + FA+I F SI+ +
Sbjct: 74 IEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF 363
F YG+I +++ D + +S+GF F+ F
Sbjct: 39 FERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 277 FGAYGEIESINVKTDPNTGRSRGFAFIVF 363
F YG+I +++ D + +S+GF F+ F
Sbjct: 39 FERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 314 RQIQTQADHEGLPSLCLR 367
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 254 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 123
C P QP + S+V+ W + + R A CI L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,908,144
Number of Sequences: 27780
Number of extensions: 268952
Number of successful extensions: 882
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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