Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_C20
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38616-1|AAA64231.1| 383|Homo sapiens brain and reproductive or... 89 2e-17
BC001251-1|AAH01251.1| 383|Homo sapiens brain and reproductive ... 89 2e-17
AY438031-1|AAR30499.1| 383|Homo sapiens BRCA1/BRCA2-containing ... 89 2e-17
AK000097-1|BAA90943.1| 415|Homo sapiens protein ( Homo sapiens ... 89 2e-17
AF420605-1|AAL17818.1| 379|Homo sapiens BRE alpha a' isoform pr... 89 2e-17
AF420603-2|AAL17816.1| 376|Homo sapiens BRE beta b isoform prot... 89 2e-17
AF420602-1|AAL17814.1| 376|Homo sapiens BRE alpha b isoform pro... 89 2e-17
AF015767-1|AAB69387.1| 383|Homo sapiens brain and reproductive ... 89 2e-17
AK123076-1|BAC85532.1| 392|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AC096552-1|AAX88935.1| 126|Homo sapiens unknown protein. 51 3e-06
AC021171-2|AAY24156.1| 100|Homo sapiens unknown protein. 50 7e-06
X06562-1|CAA29808.1| 638|Homo sapiens protein ( Human mRNA for ... 34 0.49
M28466-1|AAA52555.1| 638|Homo sapiens GHR protein. 34 0.49
AK130273-1|BAC85316.1| 401|Homo sapiens protein ( Homo sapiens ... 30 6.1
BC007230-1|AAH07230.1| 494|Homo sapiens COCH protein protein. 30 8.0
AY916789-1|AAW82432.1| 550|Homo sapiens coagulation factor C ho... 30 8.0
AY358900-1|AAQ89259.1| 550|Homo sapiens COCH protein. 30 8.0
AF006740-1|AAC39545.1| 550|Homo sapiens Coch-5B2 protein. 30 8.0
>L38616-1|AAA64231.1| 383|Homo sapiens brain and reproductive
organ-expressed protein protein.
Length = 383
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>BC001251-1|AAH01251.1| 383|Homo sapiens brain and reproductive
organ-expressed (TNFRSF1A modulator) protein.
Length = 383
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>AY438031-1|AAR30499.1| 383|Homo sapiens BRCA1/BRCA2-containing
complex subunit 45 protein.
Length = 383
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>AK000097-1|BAA90943.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ20090 fis, clone COL04151. ).
Length = 415
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>AF420605-1|AAL17818.1| 379|Homo sapiens BRE alpha a' isoform
protein.
Length = 379
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>AF420603-2|AAL17816.1| 376|Homo sapiens BRE beta b isoform
protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>AF420602-1|AAL17814.1| 376|Homo sapiens BRE alpha b isoform
protein.
Length = 376
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>AF015767-1|AAB69387.1| 383|Homo sapiens brain and reproductive
organ-expressed protein protein.
Length = 383
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNL 423
+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQQ 123
Query: 424 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV-------WVGTHVVEFLIKLNVD 582
Y Q +L E SSR FEY LL + E N+ + W G FL+KL VD
Sbjct: 124 YHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAGKKNNWTGEFSARFLLKLPVD 180
Query: 583 VGRYQSFIVMALKRIP 630
++++ + P
Sbjct: 181 FSNIPTYLLKDVNEDP 196
>AK123076-1|BAC85532.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ41081 fis, clone ADRGL2009755, highly similar
to Homo sapiens brain and reproductive organ-expressed
protein (BRE) mRNA. ).
Length = 392
Score = 58.4 bits (135), Expect = 2e-08
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +1
Query: 244 WEILFDVSIPWFAPDFKF-DDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVN 420
W+I+F+ P PDF F +D FL D + L+ +LA WN S+P L V+ ELV
Sbjct: 13 WDIIFNAQYPELPPDFIFGEDAEFL--PDPSALQ----NLASWNPSNPECLLLVVKELVQ 66
Query: 421 LYKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXVWVG 543
Y Q +L E SSR FEY LL + E N+ ++ G
Sbjct: 67 QYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEIYAG 104
Score = 51.2 bits (117), Expect = 3e-06
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Frame = +1
Query: 355 SLAKWNESDPRALSNVIFELVNLYKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV 534
+LA WN S+P L V+ ELV Y Q +L E SSR FEY LL + E N+ +
Sbjct: 110 NLASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEI 166
Query: 535 -------WVGTHVVEFLIKLNVDVGRYQSFIVMALKRIP 630
W G FL+KL VD ++++ + P
Sbjct: 167 YAGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDP 205
>AC096552-1|AAX88935.1| 126|Homo sapiens unknown protein.
Length = 126
Score = 51.2 bits (117), Expect = 3e-06
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Frame = +1
Query: 355 SLAKWNESDPRALSNVIFELVNLYKSHQIRKLSEDDSSRAYFEYSALLGDSLISESNIXV 534
+LA WN S+P L V+ ELV Y Q +L E SSR FEY LL + E N+ +
Sbjct: 1 NLASWNPSNPECLLLVVKELVQQYHQFQCSRLRE--SSRLMFEYQTLLEEPQYGE-NMEI 57
Query: 535 -------WVGTHVVEFLIKLNVDVGRYQSFIVMALKRIP 630
W G FL+KL VD ++++ + P
Sbjct: 58 YAGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDP 96
>AC021171-2|AAY24156.1| 100|Homo sapiens unknown protein.
Length = 100
Score = 50.0 bits (114), Expect = 7e-06
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Frame = +1
Query: 85 LSPAFRPYVQTLCEELKLGLCKT---KIDVERISC--LPDGEEC-QFRLLLPYCSKKLKW 246
+SP P++ ++ K+GL T +I + C L G C +F+L +PY + LKW
Sbjct: 10 ISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKW 69
Query: 247 EILFDVSIPWFAPDFKF-DDESFL 315
+I+F+ P PDF F +D FL
Sbjct: 70 DIIFNAQYPELPPDFIFGEDAEFL 93
>X06562-1|CAA29808.1| 638|Homo sapiens protein ( Human mRNA for
growth hormone receptor. ).
Length = 638
Score = 33.9 bits (74), Expect = 0.49
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +1
Query: 259 DVSIPWFAPDFKFDDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNLYKSHQ 438
D+ + W AP + +++ E E L+ K + KW DP ++V + + K ++
Sbjct: 170 DIQVRWEAPRNADIQKGWMVLEYE--LQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYE 227
Query: 439 IRKLSEDDSSRAYFEYSALL 498
+R S+ +S Y E+S +L
Sbjct: 228 VRVRSKQRNSGNYGEFSEVL 247
>M28466-1|AAA52555.1| 638|Homo sapiens GHR protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.49
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +1
Query: 259 DVSIPWFAPDFKFDDESFLISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNLYKSHQ 438
D+ + W AP + +++ E E L+ K + KW DP ++V + + K ++
Sbjct: 170 DIQVRWEAPRNADIQKGWMVLEYE--LQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYE 227
Query: 439 IRKLSEDDSSRAYFEYSALL 498
+R S+ +S Y E+S +L
Sbjct: 228 VRVRSKQRNSGNYGEFSEVL 247
>AK130273-1|BAC85316.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ26763 fis, clone PRS02632, highly similar to
COCHLIN PRECURSOR. ).
Length = 401
Score = 30.3 bits (65), Expect = 6.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 100 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 267
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 195 KPLVQKLCSHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 254
Query: 268 IPWFAPDFKFDDES 309
A F +D +
Sbjct: 255 AKIAAVQFTYDQRT 268
>BC007230-1|AAH07230.1| 494|Homo sapiens COCH protein protein.
Length = 494
Score = 29.9 bits (64), Expect = 8.0
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 100 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 267
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 268 IPWFAPDFKFDDES 309
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
>AY916789-1|AAW82432.1| 550|Homo sapiens coagulation factor C
homolog, cochlin (Limulus polyphemus) protein.
Length = 550
Score = 29.9 bits (64), Expect = 8.0
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 100 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 267
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 268 IPWFAPDFKFDDES 309
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
>AY358900-1|AAQ89259.1| 550|Homo sapiens COCH protein.
Length = 550
Score = 29.9 bits (64), Expect = 8.0
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 100 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 267
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 268 IPWFAPDFKFDDES 309
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
>AF006740-1|AAC39545.1| 550|Homo sapiens Coch-5B2 protein.
Length = 550
Score = 29.9 bits (64), Expect = 8.0
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 100 RPYVQTLCEELKLGLCKTKIDVERISCLPDGE----ECQFRLLLPYCSKKLKWEILFDVS 267
+P VQ LC ++ KT + I+ L DG + FRL+L + S K + D+
Sbjct: 344 KPLVQKLCTHEQMMCSKTCYNSVNIAFLIDGSSSVGDSNFRLMLEFVSNIAKTFEISDIG 403
Query: 268 IPWFAPDFKFDDES 309
A F +D +
Sbjct: 404 AKIAAVQFTYDQRT 417
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,174,251
Number of Sequences: 237096
Number of extensions: 1595240
Number of successful extensions: 7432
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7400
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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