Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_C20
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              23   3.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   5.8  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
 Frame = +1

Query: 142 LCKTK--IDVERISCLPDGE-ECQFRLLLPYCSKKLKWEILFDVSIPWFAPDFKFDDESF 312
           +CKT+  ID ++ + + +G  + + + +  YC   LK   + D +  +     K   E  
Sbjct: 32  VCKTETGIDQQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKNNVFKPQGIKAVMELL 91

Query: 313 LISEDENFLEEKVPSLAKWNESDPRALSNVIFELVNLYKS 432
           +   DEN +++ V   +  +E +P   ++ + + V+ YK+
Sbjct: 92  I---DENSVKQLVSDCSTISEENPHLKASKLVQCVSKYKT 128


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 587 PTSTLSFIKNSTTCVPT 537
           PT+ L F   S +CVP+
Sbjct: 146 PTTCLVFSSGSVSCVPS 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,123
Number of Sequences: 438
Number of extensions: 3349
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)