Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_C15
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045640-7|AAU05589.1|  978|Caenorhabditis elegans Novel channel...    33   0.20 
U80842-3|AAB37947.1|  325|Caenorhabditis elegans Serpentine rece...    31   0.46 
Z93377-4|CAB07578.2|  325|Caenorhabditis elegans Hypothetical pr...    31   0.61 
Z74027-2|CAA98420.1|  210|Caenorhabditis elegans Hypothetical pr...    31   0.61 
AF324058-1|AAK01419.1|  210|Caenorhabditis elegans Ly-6-related ...    31   0.61 
Z68227-9|CAA92514.1|   64|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF016664-1|AAB66070.2|  324|Caenorhabditis elegans Serpentine re...    29   2.5  
AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine re...    29   3.3  
AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical ...    28   4.3  
AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical ...    28   4.3  
AF025454-8|AAK68370.1|  334|Caenorhabditis elegans Serpentine re...    28   4.3  
U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol ...    27   10.0 
U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol ...    27   10.0 
U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol ...    27   10.0 
U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol ...    27   10.0 
U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol ...    27   10.0 
AL110479-8|CAB60316.2|  337|Caenorhabditis elegans Hypothetical ...    27   10.0 

>AF045640-7|AAU05589.1|  978|Caenorhabditis elegans Novel channel
            type/putative nematodecalcium channel protein 1, isoform
            b protein.
          Length = 978

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 402  YLVWLFNTICILLCLQKLDFFKARILLTYFNMISFEYVICICKNVYYNIFQFV 560
            Y+ W   T+ I+ C+  L  F++    T  N++     + +C N Y+ IF F+
Sbjct: 925  YIDWAMATVTIVSCISML--FESPWPTTGENLVMNNGYLQVCNNFYFKIFMFI 975


>U80842-3|AAB37947.1|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein48 protein.
          Length = 325

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 453 LDFFKARILLTYFNMISFEYVICICKNVYYNIFQFVKIKXNRHFLL 590
           LDF     L+ YFN++SF      C  +   IF+  K    R F+L
Sbjct: 3   LDFSSPNWLILYFNIVSFISFFLNCTTILLIIFKSYKFNNFRFFVL 48


>Z93377-4|CAB07578.2|  325|Caenorhabditis elegans Hypothetical
           protein F13A7.8 protein.
          Length = 325

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +3

Query: 444 LQKLDFFKARILLTYFNMISFEYVICICKNVYYNIFQFVKIKXNRHFLL 590
           +  +DF   R L+ Y++ +SF  +I      Y   F+  K+   R++LL
Sbjct: 1   MYNIDFTTPRWLIIYYHSVSFTSIILNSLGFYLTTFECQKMNKYRYYLL 49


>Z74027-2|CAA98420.1|  210|Caenorhabditis elegans Hypothetical
           protein C13G3.2 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 444 LQKLDFFKARILLTYFNMISFEYVICICKNVYYNIFQFVKI 566
           LQ+   +  R L  Y N +S +YV+C C   Y N  +  ++
Sbjct: 117 LQQDGCYLLRSLPMYSNTVSMDYVVCTCNGDYCNTMEMPEV 157


>AF324058-1|AAK01419.1|  210|Caenorhabditis elegans Ly-6-related
           protein HOT-6 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 444 LQKLDFFKARILLTYFNMISFEYVICICKNVYYNIFQFVKI 566
           LQ+   +  R L  Y N +S +YV+C C   Y N  +  ++
Sbjct: 117 LQQDGCYLLRSLPMYSNTVSMDYVVCTCNGDYCNTMEMPEV 157


>Z68227-9|CAA92514.1|   64|Caenorhabditis elegans Hypothetical
           protein F49C12.11 protein.
          Length = 64

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 150 MSGREGGKKKPLKSTQE 200
           MSGR+GGK KPLK+ ++
Sbjct: 1   MSGRQGGKAKPLKAAKK 17


>AF016664-1|AAB66070.2|  324|Caenorhabditis elegans Serpentine
           receptor, class i protein77 protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 444 LQKLDFFKARILLTYFNMISFEYVICICKNVYYNIFQFVKIKXNRHFLL 590
           ++ +DF   R LL YF++I     I     +Y+ IF   ++   +++LL
Sbjct: 1   MEDIDFSDPRWLLNYFHLIGLVSFILNSIGIYFLIFNTNRLGNFKYYLL 49


>AF024501-2|AAB70367.2|  334|Caenorhabditis elegans Serpentine
           receptor, class i protein63 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +3

Query: 453 LDFFKARILLTYFNMISFEYVICICKNVYYNIFQFVKIKXNRHFLL 590
           +DF     L+TY+++I    +I    ++Y  +F+  KI   R+FLL
Sbjct: 4   IDFSTPHWLITYYHVIGVISLIFDSFSIYLILFKSSKIDNFRYFLL 49


>AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical
           protein Y106G6D.7 protein.
          Length = 948

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 164 RWQKKTPEKHPRRSPRKMDEDD 229
           RW+  +P + PRRSP + D  D
Sbjct: 556 RWENTSPIRSPRRSPLRRDNRD 577


>AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical
           protein H10E21.2 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 208 WTPSWVLFRGFF-LPPSRPDMVV 143
           WTP W LF  FF  PPS   MV+
Sbjct: 220 WTPYWALFWLFFTFPPSNNWMVI 242


>AF025454-8|AAK68370.1|  334|Caenorhabditis elegans Serpentine
           receptor, class i protein62 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +3

Query: 453 LDFFKARILLTYFNMISFEYVICICKNVYYNIFQFVKIKXNRHFLL 590
           +DF     L+TY+++I    ++    ++Y  +F+  KI   R+FLL
Sbjct: 4   IDFATPNWLITYYHVIGIISLLFDSFSIYLILFKSSKIDNFRYFLL 49


>U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform e protein.
          Length = 919

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 415 CLIQYVYCCVCR 450
           CLI+  YCCVCR
Sbjct: 90  CLIKRKYCCVCR 101


>U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform b protein.
          Length = 952

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 415 CLIQYVYCCVCR 450
           CLI+  YCCVCR
Sbjct: 90  CLIKRKYCCVCR 101


>U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform d protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 415 CLIQYVYCCVCR 450
           CLI+  YCCVCR
Sbjct: 90  CLIKRKYCCVCR 101


>U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform a protein.
          Length = 950

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 415 CLIQYVYCCVCR 450
           CLI+  YCCVCR
Sbjct: 90  CLIKRKYCCVCR 101


>U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform c protein.
          Length = 794

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 415 CLIQYVYCCVCR 450
           CLI+  YCCVCR
Sbjct: 90  CLIKRKYCCVCR 101


>AL110479-8|CAB60316.2|  337|Caenorhabditis elegans Hypothetical
           protein Y105C5B.10 protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 402 YLVWLFNTICILLCLQKLDFFKARILLTYFNMISF 506
           YL+W+F+       LQ+L F K ++ +T    I+F
Sbjct: 301 YLLWVFSDSLRKYILQRLGFTKKKLKITSVTPITF 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,021,832
Number of Sequences: 27780
Number of extensions: 188820
Number of successful extensions: 457
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)