Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_C12
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces... 98 1e-21
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 29 0.76
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 29 0.76
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 29 0.76
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 28 1.3
SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr ... 28 1.3
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 26 4.0
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 4.0
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 26 4.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 5.3
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 26 5.3
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.1
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar... 25 7.1
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 25 9.3
SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomy... 25 9.3
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 9.3
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 9.3
>SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 97.9 bits (233), Expect = 1e-21
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Frame = +2
Query: 305 EAPKEMTEDI--AEPATP--YHYENFFHDQINAKKRDYSYRVFRKVSRLAADGVYPKALE 472
+ PK D+ PAT + Y+ F+ ++++ K RD SYR F ++RLA + YP A
Sbjct: 112 QMPKHYASDLNGVGPATTPRFDYDTFYREELDKKHRDKSYRYFNNINRLAKE--YPLAHL 169
Query: 473 GPENRRVTVWCANDYLGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAGNSQMTEKLE 640
N RV VWC+NDYL H +++A I++YG GAGGTRNIAG++Q +LE
Sbjct: 170 ADPNTRVEVWCSNDYLNMGGHKKIREAMHQCIETYGGGAGGTRNIAGHNQHAVRLE 225
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 28.7 bits (61), Expect = 0.76
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 227 IISRGFRSLGNDETKCPFIQQNSIISEAPKEMTEDI 334
I+SRG S+ + E+K I N + SEAP + ++
Sbjct: 736 IVSRGLWSIDSKESKNMHISSNVVASEAPDALAANL 771
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 28.7 bits (61), Expect = 0.76
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 268 GFVISQRTKSTRYNRAIISVLLHQGR 191
GF++ T STRYN A+I V L Q R
Sbjct: 335 GFLVG--TSSTRYNEALIDVSLRQSR 358
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 0.76
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 257 NDETKCPFIQQNSIISEAPKEMTEDIAEPATPYHYENFFHDQINAKKRDYS 409
+DE C F+ + + + +D+ E + YHYE F Q+++ K S
Sbjct: 260 DDENHCEFVFLRNFLM---RTHLQDLIETTSYYHYEKFRFKQLSSLKEQSS 307
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 343 RFRDVLGHFLRSFRNDRVLLNEGAFG 266
+F + G+ ++ NDRVL EG FG
Sbjct: 464 KFYKIWGNEMQEIHNDRVLYREGIFG 489
>SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 364
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 505 TPDSYSTIFRPLQGFRIYSISSQTRHLSKNAIG 407
TP+++ +++R L F SS TR LSKN G
Sbjct: 226 TPNAFISLYRLLDRFHGLRSSSVTRSLSKNIKG 258
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 148 VFGIVEPSVREKLWCDPDEAVRKLLPDYISWIS 246
V + P + + +CD + RKLL D++S ++
Sbjct: 1598 VLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLN 1630
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 272 IWFRHFPKNEIHEI*SGNNFRTASSGSHHNFSRTLGSTIPKTDKAFYDF 126
+W + P N + + +G+N R + +H++ LG T F+DF
Sbjct: 130 LWLGNLP-NSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDF 177
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 215 FRTASSGSHHNFSRTLGSTIPKTDKAFYDFYV 120
+R A + + F++ G + +TD++ YDF V
Sbjct: 105 YRCAEAANEKEFAQKFGEKLWETDESRYDFLV 136
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 5.3
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = -3
Query: 625 HLGVS-SNIPCTTCSCSIGFDSVDSSILHSWVTGRP*VVIGTPDSY--STIFRPLQGFR- 458
HL ++ S + C+ CS S + +LHS R V+ G S+ S I+R G
Sbjct: 645 HLDLANSTVTCSECSMEYNSTSEEDILLHSRFHSR--VLGGVTVSFQCSPIYRVNYGLSS 702
Query: 457 --IYSISSQT 434
IYSI+S++
Sbjct: 703 DCIYSINSES 712
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 383 INAKKRDYSYRVFRKVSRLAADGVYPKALEGPENRR 490
+ KR+++ +FR++ +L D P+ L E R+
Sbjct: 475 VKGNKREFAPVMFRRLKKLGIDKTNPEELTEEEQRK 510
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 269 WFRHFPKNEIHEI*SGNNFRTASSGSHHNFSRTLGS 162
W+ F N + + SGN F T S + F R L +
Sbjct: 1506 WWNLFSNNMSYPLRSGNLFPTLDSSPNKKFGRHLAT 1541
>SPBC336.08 |spc24||spindle pole body protein
Spc24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 198
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 FRSLGNDETKCPFIQQNSIISEAPKEM-TEDIAEPATPYHYENFFHDQINAKK 397
+ SLG D +I ++ T I+ +PY Y N+F D ++ K
Sbjct: 143 YHSLGFDLETAENTGNKRVIIHTENDLQTVQISNKYSPYFYSNYFWDLLDDSK 195
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 240 DFVLWEMTKPNAPSFSKTLS 299
DF LW+ +KP PS+ S
Sbjct: 321 DFALWKASKPGEPSWDSPWS 340
>SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 314 KEMTEDIAEPATPYHYENFFHDQINAKKRDY 406
++M E I + P +NFFH+ + K +Y
Sbjct: 357 RDMRESIIKDEFPSFVKNFFHEWNHGDKSNY 387
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.0 bits (52), Expect = 9.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 598 CTTCSCSIGFDSVDSSILH 542
C TC C FD+V+ + H
Sbjct: 21 CFTCQCGTQFDNVERIVQH 39
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 9.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 598 CTTCSCSIGFDSVDSSILH 542
C TC C FD+V+ + H
Sbjct: 21 CFTCQCGTQFDNVERIVQH 39
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,856,778
Number of Sequences: 5004
Number of extensions: 61616
Number of successful extensions: 199
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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