Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_C09
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.096
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   4.8  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   4.8  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   4.8  
AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.             23   8.4  
AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.             23   8.4  
AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.             23   8.4  
AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.             23   8.4  
AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.             23   8.4  
AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.             23   8.4  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 29.5 bits (63), Expect = 0.096
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 233 RTARQSQNQNNEEKQPRKSHLK*LFTDIKNKESLITV*LSHYTREMS 93
           R      N+N  E + +K H + L  DI  KE+ +T  LS Y  E++
Sbjct: 445 RVQIDEHNKNFYELKKKKDHYQSLRNDIWKKETAVTQTLSGYKEELA 491


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 552 APNDGDPRELRCFRSR 599
           AP DG PRE  C R R
Sbjct: 84  APTDGKPREPLCTRLR 99


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 552 APNDGDPRELRCFRSR 599
           AP DG PRE  C R R
Sbjct: 84  APTDGKPREPLCTRLR 99


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 552 APNDGDPRELRCFRSR 599
           AP DG PRE  C R R
Sbjct: 62  APTDGKPREPLCTRLR 77


>AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 462 HTLQLNETEAADRFPARLFVEGAKRLEPLYAPNDGDPRE 578
           H L++ E   + R PA +FV     L+P +      PR+
Sbjct: 105 HLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRK 143


>AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 462 HTLQLNETEAADRFPARLFVEGAKRLEPLYAPNDGDPRE 578
           H L++ E   + R PA +FV     L+P +      PR+
Sbjct: 105 HLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRK 143


>AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 462 HTLQLNETEAADRFPARLFVEGAKRLEPLYAPNDGDPRE 578
           H L++ E   + R PA +FV     L+P +      PR+
Sbjct: 105 HLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRK 143


>AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 462 HTLQLNETEAADRFPARLFVEGAKRLEPLYAPNDGDPRE 578
           H L++ E   + R PA +FV     L+P +      PR+
Sbjct: 105 HLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRK 143


>AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 462 HTLQLNETEAADRFPARLFVEGAKRLEPLYAPNDGDPRE 578
           H L++ E   + R PA +FV     L+P +      PR+
Sbjct: 105 HLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRK 143


>AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 462 HTLQLNETEAADRFPARLFVEGAKRLEPLYAPNDGDPRE 578
           H L++ E   + R PA +FV     L+P +      PR+
Sbjct: 105 HLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRK 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,629
Number of Sequences: 2352
Number of extensions: 17077
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)