Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_C09
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   1.9  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   3.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 248 NDSRPRTARQSQNQNNEEKQPRKSH 174
           ND++    RQ+ NQNN+    R  +
Sbjct: 511 NDNKRNGNRQNDNQNNQNDNNRNDN 535


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/37 (21%), Positives = 22/37 (59%)
 Frame = -3

Query: 278 PTANPVALITNDSRPRTARQSQNQNNEEKQPRKSHLK 168
           P  + +  +T   + + ++ S+  +NE ++ R++HL+
Sbjct: 29  PMPDDMRTVTKRPKTKKSQGSRTTHNELEKNRRAHLR 65


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 592 RKQRSSRGSPSLGAYKGSNLFAPSTNKRAGNLSAASVSL 476
           +KQ SS G+ S+  Y G  L + S   ++   +A   S+
Sbjct: 782 KKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQTSV 820


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 592 RKQRSSRGSPSLGAYKGSNLFAPSTNKRAGNLSAASVSL 476
           +KQ SS G+ S+  Y G  L + S   ++   +A   S+
Sbjct: 872 KKQGSSAGTSSITKYTGCELTSESMPLQSALTAAVQTSV 910


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 496 SAASVSLSCKV*NRSGGSGLRTT 428
           S  S S +CK   ++ GSG R T
Sbjct: 572 SVMSASSTCKKDKKNAGSGSRFT 594


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 301 PRSAFDVSPLPIQSH*SPMTPAPALHDSPKTKTT 200
           P +   + P+P  S+ S M P P +  S  T  T
Sbjct: 411 PSAGAPMPPIPNMSNMSGMPPLPNMPGSMPTMPT 444


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,253
Number of Sequences: 438
Number of extensions: 4391
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)