Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_C02
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical ...    29   3.8  
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.      28   6.7  
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      27   8.8  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    27   8.8  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    27   8.8  

>AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical
           protein C41D11.7 protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 124 FVKAQRPFYAGLSPIGYPAVETDLLSNRFGEDEEAPIEVRGDGNLIN 264
           F  A+R F+   +  G     TD +SN FG+D E+ +    D  +IN
Sbjct: 521 FKNAKRRFHPN-NAFGEDGNVTDYVSNNFGQDLESFMNYSNDEEMIN 566


>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
          Length = 2914

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 348  NLPAKTEHFYR*KLINAKKNTSIENHETFATNSSTVLGVRISIFFLEWQARPH 506
            NLPA    FY   L++  + + +   +      S V+G RIS   LEW +  H
Sbjct: 1502 NLPAILNFFYTTTLLS--QESLLPFTKRICVMMSQVVGTRISSILLEWLSTVH 1552


>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 445 LQQCLVFEFQYFFWNGKLDLIRFVENYILKH 537
           L +CLV+   +  + GKLD++ +++N    H
Sbjct: 298 LTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 445 LQQCLVFEFQYFFWNGKLDLIRFVENYILKH 537
           L +CLV+   +  + GKLD++ +++N    H
Sbjct: 298 LTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 445 LQQCLVFEFQYFFWNGKLDLIRFVENYILKH 537
           L +CLV+   +  + GKLD++ +++N    H
Sbjct: 298 LTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 445 LQQCLVFEFQYFFWNGKLDLIRFVENYILKH 537
           L +CLV+   +  + GKLD++ +++N    H
Sbjct: 298 LTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 445 LQQCLVFEFQYFFWNGKLDLIRFVENYILKH 537
           L +CLV+   +  + GKLD++ +++N    H
Sbjct: 298 LTRCLVWHDTFTEFCGKLDILHYIDNETFNH 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,191,168
Number of Sequences: 27780
Number of extensions: 325094
Number of successful extensions: 775
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)