Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_B21
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.9  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   7.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   7.9  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 474 ASNLYFPDCPHAAPLIYLSIYNI 406
           A  LY+P  P  +  I + ++NI
Sbjct: 267 ALQLYYPHVPEYSSSIIMELHNI 289


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic
          acetylcholine receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 94 DILINEQFVCMLCKSFEITN 35
          ++L++ Q +C +CK    T+
Sbjct: 16 NVLLHGQVICFVCKDITSTS 35


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 474 ASNLYFPDCPHAAPLIYLSIYNI 406
           A  LY+P  P  +  I + ++NI
Sbjct: 282 ALQLYYPHVPEYSSSIIMELHNI 304


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 405 PVPLVVYEHSLVQQIP*QIYPTGPNHI 325
           P+   +Y  +L+Q  P   YP+  +HI
Sbjct: 423 PMEYRLYNPALIQSQPSPQYPSTSSHI 449


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,227
Number of Sequences: 438
Number of extensions: 3666
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)