Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_B20
(339 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosa... 154 4e-39
SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosac... 154 4e-39
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 29 0.19
SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 29 0.26
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 28 0.45
SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr 1|||... 27 0.78
SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|ch... 26 1.4
SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces ... 25 3.2
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 25 3.2
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 25 3.2
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 4.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 24 5.5
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 24 5.5
SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr 1|... 24 7.3
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 24 7.3
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 23 9.6
SPAC1142.06 |get3||GET complex ATPase subunit Get3 |Schizosaccha... 23 9.6
SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor Vp... 23 9.6
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 23 9.6
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 23 9.6
>SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein
L19B|Schizosaccharomyces pombe|chr 3|||Manual
Length = 193
Score = 154 bits (373), Expect = 4e-39
Identities = 67/102 (65%), Positives = 87/102 (85%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
M++L+ QKRLAASV++CGK+KVW+DPNEI+EI+N NSRQNIRK++KDGLVI+KP +HSR
Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
R+RK A+R GRH G+GKR+GTA ARMP +W++RQ VL
Sbjct: 61 FRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVL 102
>SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein
L19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 193
Score = 154 bits (373), Expect = 4e-39
Identities = 67/102 (65%), Positives = 87/102 (85%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
M++L+ QKRLAASV++CGK+KVW+DPNEI+EI+N NSRQN+RK+IKDGLVI+KP +HSR
Sbjct: 1 MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
R+RK A+R GRH G+GKR+GTA ARMP +W++RQ VL
Sbjct: 61 FRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVL 102
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 29.1 bits (62), Expect = 0.19
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 176 TILDHLTDVLSGVGVCDLIDFIWIQPHLLF 87
+I +H++DV G+ V LI+ + I+P +LF
Sbjct: 351 SICEHVSDVSRGIAVETLIELMIIRPKILF 380
>SPBC28E12.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 155 DVLSGVGVCDLIDFIWIQPHLLFTTSHNRGCK 60
+VLS + ++D + PHLL +S N+ CK
Sbjct: 237 EVLSKLPYFHILDKSFFSPHLLLQSSENQACK 268
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 27.9 bits (59), Expect = 0.45
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 211 ALVSAKTQKHVERVVTVALVREEVQPMRVCHRR 309
++V K K E+++ AL RE V+P R H++
Sbjct: 652 SVVEVKDAKAAEKILRYALFREVVKPKRKKHKK 684
>SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 27.1 bits (57), Expect = 0.78
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 3 LVCVGSH-RVRMSSLKLQKRLAASVMRCGKK--KVWLDPNEINEIANTNSRQNIRK 161
+V VG + ++ S + + K L S MRCG+K W++ + + NT+ + K
Sbjct: 305 IVLVGKYTHLQDSYISVIKALEHSAMRCGRKLDLQWVEASHLEASTNTSDPLSYHK 360
>SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 245
Score = 26.2 bits (55), Expect = 1.4
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 15 GSHRVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEI 128
G +++ K K L +S+ W D NE+NE+
Sbjct: 9 GDKKIQKKKKKNTKSLQSSLESAENDPFWTDANELNEL 46
>SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 25.0 bits (52), Expect = 3.2
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Frame = +3
Query: 93 KVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK-----------PVAVHSRARVRKNTEA 239
K WLDP ++++ T + +++++ I ++K+ P + A KN EA
Sbjct: 289 KSWLDPVVVSKVKFTRNYRDLQQYINPDNILKEFGGPNPWRYTYPEPCQNEAEALKNVEA 348
Query: 240 RRKGR 254
R+ R
Sbjct: 349 RKSLR 353
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.0 bits (52), Expect = 3.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 147 QNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 263
+++R +KD + +PV+V S A ++T G G
Sbjct: 141 ESLRSKLKDAMASTEPVSVDSAAAPSQSTNPEGNGGSVG 179
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 25.0 bits (52), Expect = 3.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 288 WLYLFSYQSHSDDPFYVLLCFCGHERGS 205
W Y+S D FY ++ F H RGS
Sbjct: 824 WGETMVYESIISDDFYSMIRFLVHHRGS 851
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 24.6 bits (51), Expect = 4.2
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 302 WHTRIGCTSSLTKATVTTLSTCFCVFADTSAGVYCYRFLDDETILD 165
++ + C S T + TC +TSA +Y RF+ D+ D
Sbjct: 297 YYAVVECDSVRTAKVI--YETCDGAEYETSANIYDLRFIPDDVTFD 340
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 24.2 bits (50), Expect = 5.5
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = +3
Query: 135 TNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 233
T S ++ +IK+ +KP ++++++KN+
Sbjct: 912 TESLNQVKNLIKNDTSNRKPFGAENQSKLKKNS 944
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 24.2 bits (50), Expect = 5.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 45 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG 176
+L +RLAA + RC ++ W D + NI+K+I DG
Sbjct: 1113 QLAERLAARLDRCKTQRQW-DHVVYALSLLPHKADNIQKLIDDG 1155
>SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 179 ETILDHLTDVLSGVGVCDLIDFIWIQPH 96
+TI D + G +C+L +FI + PH
Sbjct: 145 KTIRDPKLSIYVGRRLCELHNFILLHPH 172
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 161 DDQGWSRHQETCSSTLPRSCPQKHRST*K 247
DD+G+S +++T ++ P RST K
Sbjct: 132 DDEGYSLNEDTTATNASFRYPMNQRSTRK 160
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Frame = -1
Query: 288 WLYLFSYQSHSDD----PFYVLLC 229
WL++F Q H ++ P Y +LC
Sbjct: 320 WLFIFIIQPHKEERFMYPIYPVLC 343
>SPAC1142.06 |get3||GET complex ATPase subunit Get3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 233 CVFADTSAGVYCYRFLDDETILDHLTDVLSGV 138
CV DT+ + RFL+ T+L+ L G+
Sbjct: 143 CVIFDTAPTGHTLRFLNFPTVLEKALGKLGGL 174
>SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor
Vps902 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 23.4 bits (48), Expect = 9.6
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -2
Query: 299 HTRIGCTSSLTKATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDV 150
+ RI C S+ T A L F + + C DDE + + L +V
Sbjct: 127 YDRIFCLSTSTDAAKDDLLKKFIASEEKKELINCIPIPDDEKLTNRLHEV 176
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 23.4 bits (48), Expect = 9.6
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1
Query: 114 HLDPTTPSFYHIA 76
HLDPT+P+ ++IA
Sbjct: 568 HLDPTSPTKHYIA 580
>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 312 VPSVAYAHWLYLFSYQS 262
+PSV YA W L Y S
Sbjct: 255 IPSVCYAAWQLLAKYDS 271
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,555,322
Number of Sequences: 5004
Number of extensions: 30353
Number of successful extensions: 114
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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