Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_B20
(339 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 172 3e-43
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 172 3e-43
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 172 3e-43
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 172 3e-43
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 172 3e-43
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 172 3e-43
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 172 3e-43
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 172 3e-43
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 172 3e-43
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 141 6e-34
BC112926-1|AAI12927.1| 1306|Homo sapiens ARHGEF10 protein protein. 28 6.4
AF327295-1|AAK37510.1| 47|Homo sapiens T cell receptor beta ch... 28 6.4
AF009205-1|AAB71662.1| 988|Homo sapiens unknown protein. 28 6.4
AB002292-1|BAA20754.2| 1405|Homo sapiens KIAA0294 protein. 28 6.4
AK124891-1|BAC85982.1| 140|Homo sapiens protein ( Homo sapiens ... 28 8.5
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 111
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 172 bits (418), Expect = 3e-43
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 33 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 212
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 213 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWVQRQXVL 338
AR RKNT ARRKGRH G GKR+GTANARMP+K W++R +L
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 141 bits (341), Expect = 6e-34
Identities = 63/83 (75%), Positives = 71/83 (85%)
Frame = +3
Query: 90 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 269
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 270 KRRGTANARMPQKELWVQRQXVL 338
KR+GTANARMP+K W++R +L
Sbjct: 61 KRKGTANARMPEKVTWMRRMRIL 83
>BC112926-1|AAI12927.1| 1306|Homo sapiens ARHGEF10 protein protein.
Length = 1306
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 180 VIKKPVAVHSRARVRKNTEARRKGRHC-GFGKRRGTANARMPQKE 311
++K PV++ S+AR K +A C G G RR AR P +E
Sbjct: 1246 LLKDPVSLRSKARRAKKAKASSALVVCGGQGHRRVHRKARQPHQE 1290
>AF327295-1|AAK37510.1| 47|Homo sapiens T cell receptor beta chain
protein.
Length = 47
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 275 SLTKATVTTLSTCFCVFADTSAGVYCYRF 189
+L AT + S FC +D+ G+Y Y F
Sbjct: 5 TLESATSSQTSVYFCAISDSGTGIYGYTF 33
>AF009205-1|AAB71662.1| 988|Homo sapiens unknown protein.
Length = 988
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 180 VIKKPVAVHSRARVRKNTEARRKGRHC-GFGKRRGTANARMPQKE 311
++K PV++ S+AR K +A C G G RR AR P +E
Sbjct: 928 LLKDPVSLRSKARRAKKAKASSALVVCGGQGHRRVHRKARQPHQE 972
>AB002292-1|BAA20754.2| 1405|Homo sapiens KIAA0294 protein.
Length = 1405
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 180 VIKKPVAVHSRARVRKNTEARRKGRHC-GFGKRRGTANARMPQKE 311
++K PV++ S+AR K +A C G G RR AR P +E
Sbjct: 1345 LLKDPVSLRSKARRAKKAKASSALVVCGGQGHRRVHRKARQPHQE 1389
>AK124891-1|BAC85982.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ42901 fis, clone BRHIP3011241. ).
Length = 140
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 313 SSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRARECT 200
S FCG+ + PL LP P PF + ++R R C+
Sbjct: 102 SCFCGLSPSSRPLELPPPS-CPFFSKAPWVRIRGSVCS 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,457,362
Number of Sequences: 237096
Number of extensions: 1161093
Number of successful extensions: 2415
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2415
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -