Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_B14
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 235 3e-63
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 235 5e-63
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 204 9e-54
SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 30 0.33
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 29 0.58
SPCC830.10 |||nucleoside triphosphatase |Schizosaccharomyces pom... 28 1.3
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 2.3
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 7.1
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 9.4
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 25 9.4
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 25 9.4
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 235 bits (576), Expect = 3e-63
Identities = 104/173 (60%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Frame = -3
Query: 639 EYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINN 460
EYR ER++I LAR+AR GNY+VP E KL FV+RIRGIN + PK RK++QL RL QINN
Sbjct: 61 EYRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINN 120
Query: 459 GVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 280
G+FV+ NKA ML++ EPY+ +G PN K+VREL+YKRGF K++ QRIP++ N+I+E L
Sbjct: 121 GIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAAL 180
Query: 279 HKHNIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGGWR-KKTIHYVDRG 124
K++I+ VEDLIHEI+TVG FK A+NFLWPFKL++P GGWR +K H+++ G
Sbjct: 181 GKYSILSVEDLIHEIYTVGPNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGG 233
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 235 bits (574), Expect = 5e-63
Identities = 104/173 (60%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Frame = -3
Query: 639 EYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINN 460
EYR ER++I L R+AR GNYYVP E KL FVIRIRGIN + PK RK++QL RL QINN
Sbjct: 62 EYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINN 121
Query: 459 GVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRL 280
GVFV+ NKAT ML++ EPY+ +G PNLK+VREL+YKRGF K++ QRI ++ N+I+E L
Sbjct: 122 GVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAAL 181
Query: 279 HKHNIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGGWR-KKTIHYVDRG 124
K++I+ +EDLIHEI+TVG FK A+NF+WPF+L++P GGWR +K H+++ G
Sbjct: 182 GKYSILSIEDLIHEIYTVGPNFKQAANFIWPFQLSSPLGGWRDRKFKHFIEGG 234
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 128 GGDFGNREDKINDLLRRMV 72
GGD G R++ IN L+R+M+
Sbjct: 233 GGDAGKRDEHINSLVRKML 251
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 204 bits (498), Expect = 9e-54
Identities = 91/175 (52%), Positives = 125/175 (71%)
Frame = -3
Query: 645 VKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQI 466
+ YR +ER+ IRL R A+N+G+ +VP E KL FVIRI G+ + PK+RKVL+L RL +I
Sbjct: 58 INNYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRI 117
Query: 465 NNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEK 286
NN VFVR NKA MLRI EPY+ +G PNL SVREL+YKRGF K++GQRI ++ N+++E+
Sbjct: 118 NNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEE 177
Query: 285 RLHKHNIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGGWRKKTIHYVDRGR 121
L K+++I +ED+IHEI+ VG FK + FLWPF L +K + + + GR
Sbjct: 178 ALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEKKVKHFNEGR 232
>SPAC1805.06c |hem2||porphobilinogen synthase Hem2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 29.9 bits (64), Expect = 0.33
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 381 NLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVE-DLIHEIFTVGEKFKYA 205
N KSV + G L+G +I I+ + ++ R+ VE +L H++ + K+A
Sbjct: 143 NAKSVERIAEVSGNYALAGAQI-ISPSDCMDGRVKAIKQKLVELELSHKVCVISYSAKFA 201
Query: 204 SNFLWPFK 181
S F PF+
Sbjct: 202 SGFFGPFR 209
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 29.1 bits (62), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 152 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 286
LR P L L+GH + L +SP + SST +C+W L
Sbjct: 311 LRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDL 355
>SPCC830.10 |||nucleoside triphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 188
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 139 MNGLLAPTTSWIVQFEGPQEITRVLELFSNSE 234
MNGL P W + GP + R++ F E
Sbjct: 75 MNGLPGPYVKWFLNSVGPDGLYRMVSAFDTKE 106
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 208 VLELFSNSEDLMDEVLNTDNVVFMEPLLNNAVGSDWYTLSTQLGESTFVY*LTDTL*VGV 387
+L +F+ +D M L T+N + +L +A W TL G + F Y L +G+
Sbjct: 319 LLPIFNKVQDRMRYSLLTNNAIVFALVLGSAFYHSWITLG--CGNANFYYASNLILALGL 376
Query: 388 S 390
S
Sbjct: 377 S 377
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -3
Query: 594 ARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRL 475
+ N+G YY G +AFV I G+ + SP++ LQL ++
Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 7.1
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 115 PKSPPVDIMNGLLAPTTSWIVQFEGPQEITRVLELFSN-----SEDLMDEVLNTDNVVFM 279
P ++I + L AP+ SW + E+ +L + S + + +E+ TD V
Sbjct: 758 PFGKDLEIDSNLFAPSNSWFNSWHSRLELDSILAIISQFSLPVYKKMNEELSTTDEAV-- 815
Query: 280 EPLLNNAVGSD 312
LL N+V +D
Sbjct: 816 -KLLANSVLND 825
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.0 bits (52), Expect = 9.4
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 149 FLRQPPVGLFNL---KGHRKLLAYLNFSP-TVKISWMRSSTQIMLCLWSLFSTMLLEVIG 316
+LR+P + N KG L+ +F+ T + S + S LC F+ E IG
Sbjct: 854 YLRKPHMSRENFGISKGSGGLIGSFDFNKFTRQASKVHGSWISSLCSSQAFA----EFIG 909
Query: 317 IRCPLSLANPRL 352
RC L L +PR+
Sbjct: 910 DRCELDLNDPRV 921
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +2
Query: 173 LFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSLFSTMLLEVIGI 319
LF+L G L ++ + T+K SW ++ + L + ++++ I
Sbjct: 76 LFSLFGSCMLFRFIKYPSTIKDSWNHHLEKLFIATCLLSISTFIDMLAI 124
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 426 NMLRIAEPYI--AWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSI 295
N +I+ PY GYP +K + L YK KLS +PI + I
Sbjct: 35 NSTKISPPYSENVEGYPKVKIEKSLPYKYDNCKLS-ICVPIVTTCI 79
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,680,975
Number of Sequences: 5004
Number of extensions: 58665
Number of successful extensions: 158
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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