Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_B13
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 116 7e-26
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 116 7e-26
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 116 7e-26
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 116 7e-26
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 116 7e-26
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 71 4e-12
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 93.5 bits (222), Expect = 6e-19
Identities = 44/76 (57%), Positives = 53/76 (69%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRC TVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (279), Expect = 7e-26
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = +3
Query: 357 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 533
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 534 SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
Score = 96.7 bits (230), Expect = 6e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +2
Query: 122 FNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 301
FNQPAR+ RR++ R +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 302 LNPVFARTIGIAVDPR 349
++ ARTIGI+VDPR
Sbjct: 86 IHKKVARTIGISVDPR 101
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 61 NNMIPNGHFHKDWQRFVKT 117
N M+ HFHKDWQR V T
Sbjct: 6 NGMVLKPHFHKDWQRRVAT 24
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 70.9 bits (166), Expect = 4e-12
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +3
Query: 477 KLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKD 647
KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,964,473
Number of Sequences: 237096
Number of extensions: 1831590
Number of successful extensions: 3951
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3936
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -