Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP14_F_A21
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 226 6e-59
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 226 6e-59
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 226 6e-59
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 226 6e-59
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 226 6e-59
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 226 6e-59
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 226 6e-59
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 226 6e-59
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 226 6e-59
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 226 6e-59
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 226 6e-59
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 225 1e-58
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 224 2e-58
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 224 2e-58
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 2e-53
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 166 7e-41
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 121 3e-27
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 104 2e-22
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 100 4e-21
AK021929-1|BAB13940.1| 356|Homo sapiens protein ( Homo sapiens ... 31 2.7
BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein. 30 8.3
BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein. 30 8.3
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 409 F 411
F
Sbjct: 124 F 124
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 177
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 178 QGVLGIKVKIMLPWDPT-GKIGPKKP 202
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 409 F 411
F
Sbjct: 124 F 124
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 177
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 178 QGVLGIKVKIMLPWDPT-GKIGPKKP 202
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 226 bits (552), Expect = 6e-59
Identities = 110/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 225 bits (549), Expect = 1e-58
Identities = 109/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 224 bits (548), Expect = 2e-58
Identities = 109/121 (90%), Positives = 116/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 224 bits (547), Expect = 2e-58
Identities = 109/121 (90%), Positives = 115/121 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 408
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLR 124
Query: 409 F 411
F
Sbjct: 125 F 125
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 178
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 179 QGVLGIKVKIMLPWDPT-GKIGPKKP 203
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (507), Expect = 2e-53
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 387
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 166 bits (403), Expect = 7e-41
Identities = 81/91 (89%), Positives = 86/91 (94%)
Frame = +1
Query: 49 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 228
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 229 RIRELTSVVQKRFNIPEQSVELYAEKVATRG 321
RIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 121 bits (291), Expect = 3e-27
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +1
Query: 220 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 399
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 400 VLRF 411
VLRF
Sbjct: 66 VLRF 69
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 69 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 122
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 104 bits (250), Expect = 2e-22
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 410 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 40 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 93
Score = 83.8 bits (198), Expect = 5e-16
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 292 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRF 411
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRF
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 40
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 94 QGVLGIKVKIMLPWDPT-GKIGPKKP 118
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 100 bits (240), Expect = 4e-21
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = +2
Query: 416 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 571
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLR
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLR 52
Score = 35.9 bits (79), Expect = 0.13
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 573 QGVLGIKVKIMLPVGPAKARTXPKKP 650
QGVLGIKVKIMLP P + PKKP
Sbjct: 53 QGVLGIKVKIMLPWDPT-GKIGPKKP 77
>AK021929-1|BAB13940.1| 356|Homo sapiens protein ( Homo sapiens
cDNA FLJ11867 fis, clone HEMBA1006976, weakly similar to
H.sapiens mRNA for Gal-beta(1-3/1-4)GlcNAc
alpha-2.3-sialyltransferase. ).
Length = 356
Score = 31.5 bits (68), Expect = 2.7
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Frame = +1
Query: 256 QKRFNIPEQ---SVELYAEKVATRGLCAIAQAESLRYK-LIGGLAVRRACYGVLRFHHGI 423
Q R+N P+Q + E+ +AT+ L + R + G R+ GVLR H I
Sbjct: 249 QGRYNFPQQERGTSEVCTAWLATQVLAKVTVGLLARPPPAVPGALTMRSGGGVLRMKHLI 308
Query: 424 W--RPWL*SCCIWQAAWSTCQINEVCRWTHD----PLWRPL 528
W PW +C +W + + H P WRPL
Sbjct: 309 WPFSPWR-ACWVWVLEMMGGPVEKQRPIRHPGRARPCWRPL 348
>BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein.
Length = 696
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +2
Query: 122 WPRTATPAWKSGS---LPSARRSLLWPP 196
WP A P W SGS LP +RSL PP
Sbjct: 634 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 661
>BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein.
Length = 223
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +2
Query: 122 WPRTATPAWKSGS---LPSARRSLLWPP 196
WP A P W SGS LP +RSL PP
Sbjct: 161 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,271,883
Number of Sequences: 237096
Number of extensions: 2204486
Number of successful extensions: 8616
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8615
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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