Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_A04
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0525 + 4564885-4565221,4565337-4565476,4565582-4565677,456...    29   4.2  
02_05_0996 - 33380363-33380597,33380767-33380851,33381206-333815...    29   4.2  
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73...    28   7.4  
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773...    27   9.8  
09_06_0089 + 20781086-20782985,20783463-20783538,20783593-207836...    27   9.8  

>08_01_0525 +
           4564885-4565221,4565337-4565476,4565582-4565677,
           4566079-4566146,4566542-4566643,4567492-4567630,
           4567758-4567898,4568241-4568297,4568400-4568459,
           4568866-4568973,4569834-4569994,4570453-4570531,
           4571357-4571490,4571846-4571951,4572244-4572432,
           4572595-4572822,4573028-4573183,4573491-4573532,
           4573752-4573868,4573945-4574121
          Length = 878

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 86  IVKILMNLCIKKLNN*DNLIVSLILNTMADSDDE 187
           ++K L   C+K LNN D  + +L+L+  A  DDE
Sbjct: 547 VIKYL-EFCVKDLNNEDPGVHNLLLSLYAKKDDE 579


>02_05_0996 -
           33380363-33380597,33380767-33380851,33381206-33381557,
           33381690-33382340
          Length = 440

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -2

Query: 550 DWWHGXSITXMSWMWAKMIXGPTI*PIRVMWHTSISSIFNRPFWSDPFI 404
           D +H   ++ +S+ W  +  G T+    ++W     S  N   W+DP+I
Sbjct: 2   DCFHSKQMSNVSYTWRSIQKGLTVLQNGMIWRVGNGSKIN--IWADPWI 48


>11_01_0101 -
           738305-738556,738723-738977,739306-739554,739649-739843,
           739953-740060,740184-740405,740806-741390,741495-741863,
           742423-742529,742755-742883,743027-743084,743166-743248,
           744115-744196,744274-744350,744477-744560,744649-744718,
           744796-744884,744965-745654,746127-746439
          Length = 1338

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 645 ESSWAARKALKVIMVGGPSAXPTG 574
           E+ W A +  K I VGGP A P G
Sbjct: 756 ETEWPAVEHFKCINVGGPMARPDG 779


>12_01_0833 -
           7730761-7731030,7731171-7731425,7731565-7731736,
           7731873-7732106,7732362-7732495,7734116-7734199,
           7735086-7735376,7735566-7735898,7736351-7736424,
           7736558-7736653,7736876-7737029,7737118-7737221,
           7737325-7737485,7737774-7738087,7738950-7739231,
           7739909-7740210,7740513-7740713,7740924-7741014,
           7741424-7741500,7741595-7741754,7742026-7742110,
           7742194-7742288
          Length = 1322

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 302 LSILLVHDYALHVYRCFGNCC 240
           L + LVH  AL +YRC G+ C
Sbjct: 542 LVLFLVHTGALSLYRCVGSYC 562


>09_06_0089 +
           20781086-20782985,20783463-20783538,20783593-20783669,
           20784301-20784405,20784601-20784659
          Length = 738

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 243 AVTEAAIDVKSVVVDEKNGQRGLVEVD 323
           AVT + + + SVV+D+KN  RG +  D
Sbjct: 291 AVTSSKMSIHSVVMDKKNSTRGALIPD 317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,359,273
Number of Sequences: 37544
Number of extensions: 321204
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)