Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP14_F_A04
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...    28   6.6  
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL021173-1|CAE17951.1|   89|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical
           protein E01A2.2a protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = +2

Query: 167 MADSDDEYDRKRRDKFRGERGPAD 238
           M DSDD+ DR RRDKF  ER   D
Sbjct: 1   MVDSDDDGDR-RRDKFARERRDED 23


>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 425 WPIEDRRYGGMPHDSYG 475
           W ++ R+YG +PH  YG
Sbjct: 498 WYMDQRKYGSVPHGGYG 514


>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical protein
            C25H3.8 protein.
          Length = 2148

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 402  QIKGSDQNGLLKIEDMEVCHMTLMGHMVGPXIILAHIQL 518
            ++   + NG++ +  +E  H TL  + VGP  ++ H +L
Sbjct: 930  EVMSVEPNGVVSVP-LEFAHCTLTAYPVGPMPVIEHAEL 967


>AL021173-1|CAE17951.1|   89|Caenorhabditis elegans Hypothetical
           protein VK10D6R.1 protein.
          Length = 89

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 446 YGGMPHDSYGSYG 484
           YGGMP+  YG YG
Sbjct: 21  YGGMPYGGYGGYG 33


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,662,606
Number of Sequences: 27780
Number of extensions: 269931
Number of successful extensions: 658
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)