Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_P24
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 87 5e-18
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 87 5e-18
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 87 5e-18
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 87 7e-18
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 87 7e-18
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 86 1e-17
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 57 6e-09
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 38 0.003
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 38 0.003
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 33 0.091
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 33 0.091
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.48
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 29 2.6
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.0
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 27 7.9
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 27 7.9
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 27 7.9
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 27 7.9
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
+GI+D +R+PKEQG+ + WRGN A VIRYFP QA+NFAFKD YK +FL G+DK
Sbjct: 56 KGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWK 115
Query: 443 LFRWVIXASG 472
F + + G
Sbjct: 116 FFAGNLASGG 125
Score = 68.9 bits (161), Expect = 2e-12
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKG
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKG 57
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
+GI+D +R+PKEQG+ + WRGN A VIRYFP QA+NFAFKD YK +FL G+DK
Sbjct: 56 KGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWK 115
Query: 443 LFRWVIXASG 472
F + + G
Sbjct: 116 FFAGNLASGG 125
Score = 68.9 bits (161), Expect = 2e-12
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKG
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKG 57
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
+GI+D +R+PKEQG+ + WRGN A VIRYFP QA+NFAFKD YK +FL G+DK
Sbjct: 56 KGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFLEGLDKKKDFWK 115
Query: 443 LFRWVIXASG 472
F + + G
Sbjct: 116 FFAGNLASGG 125
Score = 68.9 bits (161), Expect = 2e-12
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKG
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKG 57
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 87.0 bits (206), Expect = 7e-18
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
+GIVD VR+PKEQG + WRGN A VIRYFP QALNFAFKD YK +F G+DK
Sbjct: 69 KGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWK 128
Query: 443 LFRWVIXASG 472
F + + G
Sbjct: 129 FFAGNLASGG 138
Score = 67.3 bits (157), Expect = 6e-12
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
D F D +GG +AAVSKTAVAPIERVKLLLQVQ S IAAD+RYKG
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASLTIAADKRYKG 70
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 87.0 bits (206), Expect = 7e-18
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
+GIVD VR+PKEQG + WRGN A VIRYFP QALNFAFKD YK +F G+DK
Sbjct: 69 KGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWK 128
Query: 443 LFRWVIXASG 472
F + + G
Sbjct: 129 FFAGNLASGG 138
Score = 67.3 bits (157), Expect = 6e-12
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
D F D +GG +AAVSKTAVAPIERVKLLLQVQ S IAAD+RYKG
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASLTIAADKRYKG 70
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 86.2 bits (204), Expect = 1e-17
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
+GI+D R+PKEQG +FWRGN A V+RYFP QALNFAFKD YK++F G+DK
Sbjct: 56 KGIMDVLARVPKEQGYAAFWRGNLANVLRYFPTQALNFAFKDTYKKMFQEGIDKNKEFWK 115
Query: 443 LFRWVIXASG 472
F + + G
Sbjct: 116 FFAGNLASGG 125
Score = 65.3 bits (152), Expect = 2e-11
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = +1
Query: 130 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGYRRRLRPHPQGAG 306
F D +GG +AA+SKTAVAPIERVKLLLQV VS+ + AD++YKG L P+ G
Sbjct: 12 FLVDLASGGTAAAISKTAVAPIERVKLLLQVSDVSETVTADKKYKGIMDVLARVPKEQG 70
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVF 406
+G+ D FV+I K G + +RG F V +A F D K ++
Sbjct: 158 QGLTDCFVKIVKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTAKTLY 205
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 83.0 bits (196), Expect = 1e-16
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2
Query: 266 GIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
GI+DAFVR+PKEQG +SFWRGN VIRYFP QA NFAF D YK + L + + L+
Sbjct: 66 GIIDAFVRVPKEQGFVSFWRGNMTNVIRYFPTQAFNFAFNDLYKSILLKNMKRENNVLS 124
Score = 68.1 bits (159), Expect = 3e-12
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +1
Query: 115 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
+D FA D L GG+SA+VSKT VAPIERVK+LLQVQ+ K I AD+RY G
Sbjct: 16 SDAQKFAIDLLIGGVSASVSKTVVAPIERVKILLQVQYSHKDIPADKRYNG 66
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 68.9 bits (161), Expect = 2e-12
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKG
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKG 57
Score = 55.6 bits (128), Expect = 2e-08
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQ 364
+GI+D +R+PKEQG+ + WRGN A VIRYFP Q
Sbjct: 56 KGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQ 89
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 66.1 bits (154), Expect = 1e-11
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDKXTXXLA 442
+GIVD F+R+P+EQG LSFWRGN+ ++R ++L +FK+ +++ L GVD T
Sbjct: 62 KGIVDCFIRVPREQGFLSFWRGNWVNILRSCSQESLGLSFKEFFRKYSLEGVDPKTQH-- 119
Query: 443 LFRWVI 460
RW++
Sbjct: 120 -SRWLV 124
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/50 (54%), Positives = 39/50 (78%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG 267
D + F+KDF+AG +AA+SKT +AP+ERVKL+LQ+Q+ +A + RYKG
Sbjct: 14 DVIKFSKDFMAGATAAAISKTVIAPVERVKLILQLQNSQTTLALENRYKG 63
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 57.2 bits (132), Expect = 6e-09
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = +2
Query: 266 GIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGGVDK 424
GI D +I EQG ++ WRGN A V R PN LNFAF+D Y+ L VD+
Sbjct: 56 GIRDCISKIRLEQGAMALWRGNGAGVARCLPNHTLNFAFRDIYRNTLLKNVDR 108
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +1
Query: 118 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGYR 273
D + +K LAG +AA+SKT AP +RVKL+LQ+Q S+ A+ Y G R
Sbjct: 9 DVLETSKKCLAGSAAAAISKTTTAPFDRVKLVLQLQRQSEFAMAE--YNGIR 58
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 266 GIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYK---QVFLGGVDKXT 430
G+V + E G+ SFWRGN VI+ P A+ F D+ K Q + GG + T
Sbjct: 283 GVVSCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRWMQEYKGGAELST 340
Score = 35.1 bits (77), Expect = 0.030
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 136 KDFLAGGISAAVSKTAVAPIERVKLLLQV 222
+ +AGG++ A+S+T AP +R+K+ LQV
Sbjct: 246 RHLVAGGVAGAMSRTCTAPFDRIKVYLQV 274
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 266 GIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFL 409
G+V+A RI KE+G+L+ WRG V+R A A + KQ L
Sbjct: 149 GVVNALTRITKEEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQALL 196
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 33.5 bits (73), Expect = 0.091
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 112 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGYRRRLRPH 291
+ DP + F+ G + AP ER+KLLLQ+Q + ++ LR H
Sbjct: 89 MEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQIQDDKAHTKFNGPIDATKQLLRTH 148
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.091
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 112 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGYRRRLRPH 291
+ DP + F+ G + AP ER+KLLLQ+Q + ++ LR H
Sbjct: 89 MEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQIQDDKAHTKFNGPIDATKQLLRTH 148
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 142 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK 264
FL G ++ A TAV PI+ VK +Q Q S + YK
Sbjct: 373 FLLGSVAGACGATAVYPIDLVKTRMQNQRTSGSFVGEVMYK 413
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 266 GIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVF 406
G++D ++ KE+G +S W+G A V R P A+ + +++F
Sbjct: 602 GVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYEVLQRLF 648
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 272 VDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVF 406
+D F ++ K +GLL +RG ++ P +A+ D + F
Sbjct: 416 LDCFKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDYMRDKF 460
>Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical
protein F43G9.3 protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.48
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 281 FVRIP-KEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQV 403
F+++ +E G + +RGN A + R P ++ FA ++YK++
Sbjct: 58 FIKLTYRENGFFALYRGNSATMARVVPYASMQFAAFEQYKKL 99
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -2
Query: 299 PWGCGXXXXRYPL*RWSAAICLLTCCTWSSSLTRSMGATAVLETAAEIPPARKS 138
P+ CG YP R SA C + CT S T++ T T+ P S
Sbjct: 20 PYDCGAHGYCYPANRTSATTC--SECTCSDESTQTSDTTCTAPTSCSPNPCTLS 71
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 506 GTKRGWVXAAPTRRPRLPSEITPEXAXSCQPRRGTPA 396
G RG AP+RRP +E+ PE + PA
Sbjct: 241 GAFRGAARGAPSRRPAPAAEVAPETPVAAPMAPAAPA 277
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 124 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 225
+ F ++ AG ++ + + P ER+K LLQVQ
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 263 RGIVDAFVRIPKEQGLLSFWRGNFAXVIRYFPNQALNFAFKDKYKQVFLGG 415
+G V I K +GL ++G A + + NQA+ F + K + GG
Sbjct: 162 KGFVHGVGCIVKAEGLGGIYKGVTATMAKQGSNQAIRFFVMETLKDWYRGG 212
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 124 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 225
+ F ++ AG ++ + + P ER+K LLQVQ
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 124 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 225
+ F ++ AG ++ + + P ER+K LLQVQ
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,678,389
Number of Sequences: 27780
Number of extensions: 188807
Number of successful extensions: 537
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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