Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_P22
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   1.9  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +3

Query: 318 LMLVRSSSTVYAAAVWNSLAPRTCGLNTPGWKT 416
           L +    S V AA VWN    R       GW+T
Sbjct: 56  LTVQAKDSNVLAAKVWNGQYARVQQSMPDGWET 88


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +2

Query: 98  NMKRNLKDKMNENKHLNHGISKTLSKTKPMNKTNRKKGCRQRSN 229
           N+K  +++    N + N  I  T ++     K N+K    Q++N
Sbjct: 404 NVKELIRNTHCVNNNQNDNIQNTNNQNDNNQKNNKKNANNQKNN 447



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/46 (19%), Positives = 21/46 (45%)
 Frame = +2

Query: 92  FKNMKRNLKDKMNENKHLNHGISKTLSKTKPMNKTNRKKGCRQRSN 229
           F+ +  N+K+ +     +N+  +  +  T   N  N+K   +  +N
Sbjct: 398 FRILGANVKELIRNTHCVNNNQNDNIQNTNNQNDNNQKNNKKNANN 443


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 508 DADLAYLLFRPDVFWEIKSKTLFEHLPV 425
           D D  + ++RPD F++   K  F  + +
Sbjct: 80  DVDWLHNIWRPDCFFKNAKKVTFHEMSI 107


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +2

Query: 320 HARPEQQYSLCCCCMELPCPKNLWLEYTWME 412
           H   ++  SL C     P P+  W   T  E
Sbjct: 248 HVAQDESTSLVCVAQACPTPEYRWYAQTGSE 278


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +2

Query: 320 HARPEQQYSLCCCCMELPCPKNLWLEYTWME 412
           H   ++  SL C     P P+  W   T  E
Sbjct: 248 HVAQDESTSLVCVAQACPTPEYRWYAQTGSE 278


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 494 CEVCVTRLRDSVRFKRQVAECTKRLMDSL 580
           CE C    R S++ K Q   CTK    S+
Sbjct: 84  CEGCKGFFRRSIQQKIQYRPCTKNQQCSI 112


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 4   LDEFFSEF*KIYSVASQSL 60
           ++EF+  F K+YSV+  SL
Sbjct: 293 VNEFYMAFSKLYSVSVVSL 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,730
Number of Sequences: 438
Number of extensions: 3565
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)