Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_P14
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein glycos... 61 2e-10
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 30 0.33
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 5.4
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 26 5.4
SPAC227.13c |isu1||mitochondrial iron-sulfur cluster assembly sc... 26 5.4
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 25 7.2
SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 25 9.5
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 9.5
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 25 9.5
>SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein
glycosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 171 NVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGA--KDSNSKDLR 344
N RT+D+ + K ++ +++ N G + + + + ++ + K+ K
Sbjct: 26 NAIRTIDLRSTYTKTLTSLIIVNEGDEPQNTYRYFQQTSPGESVLSLSVSIKEEEKKGTN 85
Query: 345 LAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQFVKYVG 524
+ YD + L+ P+ G + ++++ ++P P A+ Q E+Q++ Y+
Sbjct: 86 PIKVNNNVYD------IPLQPPVKPGESRTLLIQAGLDGGVRPLPAAVDQDEEQYLVYLT 139
Query: 525 NLYTYSPYYTSTQKTSVILNTKTVESFT 608
LY SPY T Q+T +IL + ++++T
Sbjct: 140 TLYLDSPYTTDLQRTRLILPSAKIDTYT 167
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 29.9 bits (64), Expect = 0.33
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +3
Query: 186 VDISTQLVKVVSKIVLENSGKSSVKH-----FLFAVEEAAKNNLAFIGAKDSNSKDLRLA 350
VD+ +QL++++ KIVL+ S S + FL A++ + +I D D +A
Sbjct: 994 VDLPSQLIELLEKIVLQPSSFSENANLQNLLFLTAIKADKSRVMEYIDKLDKYDVD-EIA 1052
Query: 351 ETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 500
E ++ Y + +R+ + A +V + V Q Y + Q E
Sbjct: 1053 EIAIENGLYEEAFRIYKIHNKHEQAMKVLVEDIVSLDRAQDYAETVEQPE 1102
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 150 SSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKS 251
SSDI N+D T DISTQ S + NSG S
Sbjct: 1303 SSDIPKANIDFTNDISTQNTFPASPV--SNSGFS 1334
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 533 IQIANIFHKLVFLLSYSCRIW 471
+ IA +F L+F +S+ C IW
Sbjct: 277 VVIAFVFLSLIFFISFICPIW 297
>SPAC227.13c |isu1||mitochondrial iron-sulfur cluster assembly
scaffold protein Isu1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 192
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 144 TISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHF 266
T+ K+KN ++ VK+ ++ E++ KS+VKH+
Sbjct: 132 TLEEASKIKNTQIAKELCLPPVKLHCSMLAEDAIKSAVKHY 172
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 238 FSKTIFDTTFTSWVDISTVRSTFFNFISLDIVSTLALRVCIVRNNTKKSVN 86
F K + D ++V STV + I L++V ALR ++ +N K N
Sbjct: 80 FDKAMLDPYNLNYVSPSTVVFQRGSVIVLELVLLFALREYVLSSNVKDQRN 130
>SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 213 VVSKIVLENSGKSSVK 260
VVSKI +EN KSS+K
Sbjct: 244 VVSKIKIENHSKSSIK 259
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 437 CCRNCVHQSFTTISDS 484
CCRNCV +S T +S
Sbjct: 483 CCRNCVERSTTWFIES 498
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 262 CFTDDLPLFSKTIFDTTFTSWVD 194
C +LP FSKT ++ T + +D
Sbjct: 884 CVVGELPFFSKTCYNATVVAELD 906
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,715,951
Number of Sequences: 5004
Number of extensions: 58109
Number of successful extensions: 169
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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