Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_P14
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p pro...    98   1e-20
AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-P...    98   1e-20
BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p pro...    68   1e-11
BT022188-1|AAY51582.1|  387|Drosophila melanogaster IP01201p pro...    30   2.4  
AE013599-935|AAF58895.1|  387|Drosophila melanogaster CG1663-PA ...    30   2.4  
X51968-1|CAA36226.1|  471|Drosophila melanogaster protein ( Dros...    29   5.5  

>BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p
           protein.
          Length = 464

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 1/164 (0%)
 Frame = +3

Query: 144 TISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKD 323
           T + +I   NV+RT+D+++QLVK  +KI  E+S    +  ++F   E +   LA+I  KD
Sbjct: 34  TANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKD 90

Query: 324 SNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 500
           ++ K +       VKG     F       P  A A    +VETV +K ++P+P  I Q +
Sbjct: 91  ASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQND 144

Query: 501 DQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKGEAFLTS 632
            QFVKY GNL+ YS Y T++QKT+V L++  + S T+ + F  S
Sbjct: 145 KQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVS 188


>AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-PA
           protein.
          Length = 458

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 1/164 (0%)
 Frame = +3

Query: 144 TISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKD 323
           T + +I   NV+RT+D+++QLVK  +KI  E+S    +  ++F   E +   LA+I  KD
Sbjct: 28  TANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKD 84

Query: 324 SNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 500
           ++ K +       VKG     F       P  A A    +VETV +K ++P+P  I Q +
Sbjct: 85  ASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQND 138

Query: 501 DQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKGEAFLTS 632
            QFVKY GNL+ YS Y T++QKT+V L++  + S T+ + F  S
Sbjct: 139 KQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVS 182


>BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p
           protein.
          Length = 371

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 32/72 (44%), Positives = 47/72 (65%)
 Frame = +3

Query: 417 AGATVNVVVETVFTKALQPYPTAITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTV 596
           A A    +VETV +K ++P+P  I Q + QFVKY GNL+ YS Y T++QKT+V L++  +
Sbjct: 24  AAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNI 83

Query: 597 ESFTKGEAFLTS 632
            S T+ + F  S
Sbjct: 84  LSHTQVKPFSVS 95


>BT022188-1|AAY51582.1|  387|Drosophila melanogaster IP01201p
           protein.
          Length = 387

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
 Frame = +2

Query: 416 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 559
           RR H   K CC +C  Q    +T+          NSAR+  C+ CW+    L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361


>AE013599-935|AAF58895.1|  387|Drosophila melanogaster CG1663-PA
           protein.
          Length = 387

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
 Frame = +2

Query: 416 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 559
           RR H   K CC +C  Q    +T+          NSAR+  C+ CW+    L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361


>X51968-1|CAA36226.1|  471|Drosophila melanogaster protein (
           Drosophila melanogasterDNA for type I retrotransposable
           element  R1Dm.  ).
          Length = 471

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 392 CGAQGTPKRRCHSKCCCRNCVHQ 460
           CG QG    +C +   CRNC H+
Sbjct: 422 CGQQGHTAAKCQNPVDCRNCRHR 444


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,133,950
Number of Sequences: 53049
Number of extensions: 595891
Number of successful extensions: 1339
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)