Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_P12
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 236 1e-62
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.5
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 8.1
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 236 bits (577), Expect = 1e-62
Identities = 111/176 (63%), Positives = 129/176 (73%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 240
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 241 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 420
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 421 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 588
+YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHS 175
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 295 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 182
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 295 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 182
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 190 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 309
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 337 SDQPSHHNVATHVNKQRTQYGHLQSESRP 251
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 337 SDQPSHHNVATHVNKQRTQYGHLQSESRP 251
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 337 SDQPSHHNVATHVNKQRTQYGHLQSESRP 251
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 5 FFLLGVXSVDATL*--LRFKIWDSLKL*RTNN---TSRGTK*NSRGVVKGKLIIMLVNAS 169
FF+L + ++ A L +++ D + R +N T G NS+GVVK KL L S
Sbjct: 52 FFVLLLLAISAIQIDGLHYQLLDGIATFRLDNDDTTIGGVPRNSQGVVKIKLSCGLNRLS 111
Query: 170 LFRTRTNITHLNIV*LCV 223
+ T ++ L ++ C+
Sbjct: 112 VENKVTEVSSLELIHNCI 129
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 5 FFLLGVXSVDATL*--LRFKIWDSLKL*RTNN---TSRGTK*NSRGVVKGKLIIMLVNAS 169
FF+L + ++ A L +++ D + R +N T G NS+GVVK KL L S
Sbjct: 52 FFVLLLLAISAIQIDGLHYQLLDGIATFRLDNDDTTIGGVPRNSQGVVKIKLSCGLNRLS 111
Query: 170 LFRTRTNITHLNIV*LCV 223
+ T ++ L ++ C+
Sbjct: 112 VENKVTEVSSLELIHNCI 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,261,055
Number of Sequences: 27780
Number of extensions: 296467
Number of successful extensions: 782
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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