Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_P10
         (381 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272...    27   5.0  
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053...    26   8.7  

>01_06_1795 -
           39925019-39926029,39926265-39926408,39927200-39927277,
           39927722-39927838,39927925-39927981,39928492-39928623,
           39928725-39928922,39929364-39929474,39929570-39929785,
           39929879-39930064,39930590-39931192
          Length = 950

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = -2

Query: 83  INYLSDIT-HHYRAQLASRKLEI 18
           I Y+ +IT HHY+ ++ASR +E+
Sbjct: 403 IEYMINITDHHYKTEIASRCVEL 425


>02_05_1074 -
           33904518-33904697,33904886-33904985,33905085-33905311,
           33905511-33908384,33908467-33908643,33908786-33909008,
           33909727-33909806,33910657-33910817,33910892-33910937,
           33911129-33911251,33911730-33911804,33911920-33912120
          Length = 1488

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = +2

Query: 35  KLIVRDSGALC------RTNNLFMIFVILFFTLRNSR*RNVFFGQALIIIC 169
           + +++D G LC      +TN+  +  +  F   R+ + R V+FGQ ++++C
Sbjct: 724 RALLQDIGYLCYFFGHRQTNDFLLPILPAFLNDRDEQLRAVYFGQ-IVVVC 773


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,411,551
Number of Sequences: 37544
Number of extensions: 98439
Number of successful extensions: 194
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)