Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_P04
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.7  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.3  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
 Frame = +1

Query: 256 LSVQNIDFCTDINGEHHHTSRYNLMTRDEKKCLVVRRGQPFTLDLLLNRAYDPDKD--AX 429
           L V N+     +NG H+H++ Y  +              P +  LL   A+ P  +    
Sbjct: 194 LDVLNLHELYQLNGVHNHSNHYLDLVLSNSAAAACSSVYPASSLLLPQDAHHPALEIALP 253

Query: 430 SFIFYVSDIEKRGPSDGTSAAV 495
           S +F  S +    PS   S +V
Sbjct: 254 SSLFRASRVRNELPSAPNSLSV 275


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 356 LSAEDSPSRLICCSTGHMIQIKTLXHSSSMCLILRSVAP 472
           LS++D+P  LIC S G     +       +   LR+V P
Sbjct: 489 LSSKDAPMELICQSVGLSTNDRDKLDLLLLKAFLRNVPP 527


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 242  RDKVSYRCKTLISAPTSMENTTTPAD 319
            RD+   RC + +S+  ++   T PAD
Sbjct: 943  RDRHKIRCASYVSSNATVVPATQPAD 968


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,671
Number of Sequences: 2352
Number of extensions: 16884
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)