Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_P04
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.27 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.27 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.63 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.4  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 342 FVPGHQIVSAGVVVFSIDVGAE 277
           F+P HQ+   G++ FS+ VGAE
Sbjct: 2   FIPSHQVWLVGLLAFSL-VGAE 22


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 342 FVPGHQIVSAGVVVFSIDVGAE 277
           F+P HQ+   G++ FS+ VGAE
Sbjct: 2   FIPSHQVWLVGLLAFSL-VGAE 22


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 499 LLERGSETVGLWSAVYESQVDSHLMVSVTAAA 594
           LL+RG ET   W  +  + +  ++   + AAA
Sbjct: 741 LLQRGQETGAEWPGLEHANIGPYIQKMIAAAA 772


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 266 CTDKTPCLVPSITSGLKGTIIYLRRP 189
           CT    C+VPS    L   + +L+ P
Sbjct: 146 CTAVLRCVVPSFVKDLVRVVSWLQEP 171


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 266 CTDKTPCLVPSITSGLKGTIIYLRRP 189
           CT    C+VPS    L   + +L+ P
Sbjct: 146 CTAVLRCVVPSFVKDLVRVVSWLQEP 171


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 619 LSKRQPCSQRPPSPTP*DESPLDSH 545
           + +R P S R PSP+     P   H
Sbjct: 33  VDRRSPSSSRSPSPSLLTSQPHQDH 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,258
Number of Sequences: 438
Number of extensions: 4600
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)