BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_N22
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 314 5e-86
12_02_1282 + 27528159-27529148,27529549-27529614 313 7e-86
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 309 2e-84
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 309 2e-84
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 309 2e-84
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 306 8e-84
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 306 8e-84
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 305 1e-83
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 305 2e-83
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 295 1e-80
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 161 4e-40
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 137 6e-33
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 126 2e-29
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 122 3e-28
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 76 3e-14
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 52 4e-07
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 50 2e-06
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 50 2e-06
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 49 3e-06
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 44 1e-04
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 40 0.001
09_01_0180 + 2632507-2634870 31 0.61
08_02_0889 + 22288975-22289216,22289570-22289579 31 0.80
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 30 1.9
03_01_0476 - 3660327-3661261,3661401-3661668 30 1.9
02_05_0856 - 32272757-32273494,32273578-32273866,32273961-322743... 30 1.9
09_04_0496 + 18079905-18081586,18084825-18084868,18086396-180865... 29 3.2
04_03_0901 + 20699814-20701169 29 4.3
02_05_0477 - 29339649-29340253,29340880-29341492 29 4.3
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 28 5.6
07_03_0015 - 12447947-12448393 28 5.6
06_03_1399 + 29892993-29893154,29894819-29895132,29895227-298953... 28 5.6
06_01_1061 + 8562039-8562485 28 5.6
02_05_0158 - 26362259-26362695,26363732-26363903 28 5.6
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 28 7.5
12_01_0843 + 7891622-7892524 28 7.5
03_06_0667 - 35405919-35406119,35406148-35406192 28 7.5
01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563 28 7.5
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193 27 9.9
09_04_0004 - 13584730-13585227,13585429-13585929 27 9.9
05_01_0070 + 478435-478731,479041-479079 27 9.9
03_06_0145 - 31973924-31975837 27 9.9
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 314 bits (770), Expect = 5e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 105 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 164
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 313 bits (769), Expect = 7e-86
Identities = 146/152 (96%), Positives = 149/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 105 VLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 164
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 196
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
DD+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 309 bits (758), Expect = 2e-84
Identities = 145/152 (95%), Positives = 148/152 (97%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 105 VLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 164
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTD LM ILT
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDSLMKILT 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 309 bits (758), Expect = 2e-84
Identities = 145/152 (95%), Positives = 148/152 (97%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 105 VLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 164
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTD LM ILT
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDSLMKILT 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 309 bits (758), Expect = 2e-84
Identities = 145/152 (95%), Positives = 148/152 (97%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 105 VLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 164
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTD LM ILT
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDSLMKILT 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 306 bits (752), Expect = 8e-84
Identities = 143/152 (94%), Positives = 148/152 (97%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
+LLTEAPLNPKANREKMTQIMFETF+ PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 105 ILLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 164
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTD LM ILT
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDSLMKILT 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 306 bits (752), Expect = 8e-84
Identities = 142/152 (93%), Positives = 147/152 (96%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQ+KRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPE+HP
Sbjct: 44 VMVGMGQKDAYVGDEAQAKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGY L HAILRLDLAGRDLTD+LM ILT
Sbjct: 164 VPIYEGYTLPHAILRLDLAGRDLTDHLMKILT 195
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
M D+D+ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 43
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 305 bits (750), Expect = 1e-83
Identities = 143/152 (94%), Positives = 147/152 (96%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
LLTEAPLNPKANREKMTQIMFE+FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 105 ALLTEAPLNPKANREKMTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 164
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTD LM ILT
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDALMKILT 196
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 305 bits (748), Expect = 2e-83
Identities = 142/152 (93%), Positives = 146/152 (96%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAP+NPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT
Sbjct: 104 VLLTEAPMNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEG+ L HAILRLDLAGRDLTD LM ILT
Sbjct: 164 VPIYEGFTLPHAILRLDLAGRDLTDNLMKILT 195
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
M ++D+ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 43
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 295 bits (725), Expect = 1e-80
Identities = 140/152 (92%), Positives = 145/152 (95%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 45 VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGR IVLDSGDGV+HT
Sbjct: 105 ILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR---IVLDSGDGVTHT 161
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTD LM ILT
Sbjct: 162 VPIYEGYALPHAILRLDLAGRDLTDCLMKILT 193
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 161 bits (391), Expect = 4e-40
Identities = 70/144 (48%), Positives = 99/144 (68%)
Frame = +1
Query: 223 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 402
D VG R L + YP+ +GI+ +WDDM IW H FY+EL+V P E +LLT+ PL
Sbjct: 52 DIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPL 111
Query: 403 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 582
NP NREKM + MFE +N +++ +QAVLSLYA G TG+V+DSGDGV+H VP+ +G++
Sbjct: 112 NPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFS 171
Query: 583 LXHAILRLDLAGRDLTDYLMXILT 654
H R+++AGR +T YL+ +L+
Sbjct: 172 YPHITKRMNVAGRHITSYLVDLLS 195
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 185
D +V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 2 DSGNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 137 bits (332), Expect = 6e-33
Identities = 67/174 (38%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
Frame = +1
Query: 154 APSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIITNWDDMEK 324
A +++ +W+A + VM + D ++G++A ++ L YPI +G + NWD ME+
Sbjct: 48 ANTTKGNWMAQHSAGVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMER 104
Query: 325 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 504
W +N LR PE+H LLTE+PL P RE +IMFETFN P +Y+A Q VL+L A
Sbjct: 105 FWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAA 164
Query: 505 SGRT-----TGIVLDSGDGVSHTVPIYEGYALXHAILRLDLAGRDLTDYLMXIL 651
T TG+V+D GDG +H VP+ +GY + +I + + G+D+T ++ +L
Sbjct: 165 GYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLL 218
Score = 34.7 bits (76), Expect = 0.065
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 126 bits (304), Expect = 2e-29
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 23/186 (12%)
Frame = +1
Query: 163 SRPSWVALATRXVMVGMGQKDSYVGDEAQS---KRGILTLKYPIEHGIITNWDDMEKIWH 333
S +W+A VM + D ++GDEA S G+ T K+PI HG + +WD ME+ W
Sbjct: 50 SSANWIAQYNAGVMADL---DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQ 106
Query: 334 HTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSL----- 498
+N LR PEEH LLT++P++ +RE +IMFETFN P +Y+++Q+VLSL
Sbjct: 107 QCIFNYLRCNPEEHYFLLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSAGYA 166
Query: 499 ---------------YASGRTTGIVLDSGDGVSHTVPIYEGYALXHAILRLDLAGRDLTD 633
+A TG+V+D GDG H VP+ GY + +I +G D+T
Sbjct: 167 FLKSISDEDSVSVFCFAIPLYTGVVVDIGDGAPHVVPVVNGYVIGSSIKSFPFSGSDVTQ 226
Query: 634 YLMXIL 651
+++ +L
Sbjct: 227 FVLQLL 232
Score = 34.3 bits (75), Expect = 0.086
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
A+V+DNG+G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 122 bits (294), Expect = 3e-28
Identities = 54/141 (38%), Positives = 86/141 (60%)
Frame = +1
Query: 229 YVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 408
YVG E + +R + + P++ G +T+WD ++ IW+H F L + PEEHP+L+ E N
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNT 179
Query: 409 KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALX 588
REK ++MFE + PA+++A AVL+ +ASGR T +V+DSG G + +++GY L
Sbjct: 180 GQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQ 239
Query: 589 HAILRLDLAGRDLTDYLMXIL 651
++ + G LTD +M L
Sbjct: 240 KSVATSPIGGEFLTDCMMKSL 260
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 173
D+V+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 75.8 bits (178), Expect = 3e-14
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Frame = +1
Query: 214 GQKDSYVGDEAQSKRGI---LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVL 384
G K V D+ Q++ +TL+ PI+ G + N + ++W N L+V P +L
Sbjct: 40 GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLL 99
Query: 385 LTEAPLNPKANREKMTQIMFETFNSPAMYVA-IQAVLSLYASGR-------TTGIVLDSG 540
L E NP A + +++FE ++ VA +++ LY + R +V+D G
Sbjct: 100 LVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCG 159
Query: 541 DGVSHTVPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
+H P+ + + L +A+ R+DL G+ LT+YL +++
Sbjct: 160 FSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELIS 197
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 185
+V+DNG G+ KAGF GD P AV P+ + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 426
P++ G +WD ++ IW+H F L + PEEHP+L+ E N REK
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTNTGQQREK 140
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 409 KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG 546
+A RE++ Q+MFE FN Y + QAVLSLYA GR +G +D G G
Sbjct: 156 QALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHG 201
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGRDGRYG 215
A+VVD GS + KAG A D +P V PS + + + DG+ G
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS---KMKLEVEDGQMG 42
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Frame = +1
Query: 337 TFYNELRVAPEEHPVLL---------TE-APLNPKANREKMTQIMFETFNSPAMYVAIQA 486
T Y ++V P P+++ TE A + K R+ + ++F+ N PA+ QA
Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQA 246
Query: 487 VLSLYASGRTTGIVLDSGDGVSHTVPIYEG 576
VL+LYA+ RT+GIV++ G + VPI++G
Sbjct: 247 VLALYAAKRTSGIVVNIGFNATSIVPIFQG 276
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/132 (23%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Frame = +1
Query: 271 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 450
++ P + ++ ++ ME I F + HP+L+TE NP +R +M++++FET
Sbjct: 82 IRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMTECECNPSFSRARMSELLFET 141
Query: 451 FNSPAM----YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALXHAILRLDLAG 618
+ P++ Y+ + + ++ S ++D+ D S+ +G + A R ++ G
Sbjct: 142 YGVPSIGNDTYLFVPLLSIVHGSFEVR--IVDAKDVSSY---FLKGEPVLGACCRTNVGG 196
Query: 619 RDLTDYLMXILT 654
+TD+L +L+
Sbjct: 197 FHITDFLRQLLS 208
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 194
+V+DNG+ + G+AG+ PR F +IV RPRH+
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR 55
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 250 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 426
++R + + P++ G +WD ++ IW+H F PEEHP+L+ E N REK
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYPEEHPMLIVEPSTNTGQQREK 217
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 250 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 426
++R + + P++ G +WD ++ IW+H F EEHP+L+ E N REK
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYAEEHPMLIVEPSTNTGQQREK 118
>09_01_0180 + 2632507-2634870
Length = 787
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 73 ATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVALATRXVMVGMG 216
A ++ RL S + + AT+ P P+SRPS AL V+ G+G
Sbjct: 169 AVDLVHRLRSRILSPSSSASGSATSTPEPTSRPSPAALGASAVVAGLG 216
>08_02_0889 + 22288975-22289216,22289570-22289579
Length = 83
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 619 DQPSPDGGWRGXERNLRRWVRCG 551
+Q P+GGWR R LRRW G
Sbjct: 59 EQLCPNGGWREWRRRLRRWRALG 81
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 109 APACARPVSPATTRPAPSSRPSWVALATRXVMVGM-GQKDSY 231
APA PV+PATT P S P+ A A+ V + + D+Y
Sbjct: 104 APASQAPVAPATTVPVTVSAPTPTATASPAPAVAVSSEADNY 145
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 55 TQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRP-SWVALATRXVMVGMGQK 222
++S R A T+LL L + +A A + A T A S SW A + G+G K
Sbjct: 5 SRSRRLAVTLLLLLFAVVAAAAVATKAEAGTEDAASKEDESWTGWAKEKITEGLGLK 61
>02_05_0856 -
32272757-32273494,32273578-32273866,32273961-32274312,
32275232-32275850
Length = 665
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 27 SIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 179
SIP P++ + D V A+++D G G C+ G A A A +++G
Sbjct: 104 SIPPPPSRRPHPPRAVVDRVRAVLLDTGRGRCRVGGAAGAAGGAARGAVLG 154
>09_04_0496 +
18079905-18081586,18084825-18084868,18086396-18086502,
18087069-18087674,18087789-18088013,18088102-18088167,
18088268-18088336,18088511-18088582,18088672-18088848,
18089978-18090115
Length = 1061
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -1
Query: 354 QLIVEGVVPDLLHV-IPVGDDTVLDG--VLQSEDTSLALGLVT 235
QL V G VPD HV + + D+ V + L SE ++A GL++
Sbjct: 487 QLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLIS 529
>04_03_0901 + 20699814-20701169
Length = 451
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 87 AALVVDNGSGMCKAGFAG--DDAPRAVFPSIVGRPRHQGRDGRYGPERLL 230
A V+++ G C G A +DA +AV P++VGR GRDG E +L
Sbjct: 334 ALRVLESAVG-CAEGRAALCEDAEQAV-PAVVGRMMKAGRDGAEAAEAVL 381
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
D VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 339 GVVPDLLHVIPVGDDTVLDGVLQSEDTSLAL 247
G++ DL++V VGDD + DG QS +T+ +
Sbjct: 405 GLIRDLIYVGAVGDDAIYDG-CQSWETAFII 434
>07_03_0015 - 12447947-12448393
Length = 148
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 280 GTSE*GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDG 164
G + G+ C G R + P R R WWR PT G
Sbjct: 18 GEDDDGHRWCLGGGEARPRATLPPRCRRWWWRSEPTSRG 56
>06_03_1399 +
29892993-29893154,29894819-29895132,29895227-29895319,
29895424-29895514,29895791-29895884,29896161-29896255,
29896432-29896501,29896612-29896691,29897145-29897261,
29897566-29897642,29897907-29898432
Length = 572
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 117 MCKAGFAGDDAPRAVFPSIVGRPRHQGRDGRYGP 218
+C F D APR+V P ++ R GRYGP
Sbjct: 4 VCSRRFRDDAAPRSVQPLAAA---YEARRGRYGP 34
>06_01_1061 + 8562039-8562485
Length = 148
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 256 SCSGPRHPRRSLSGPYRPSRPWWRGRPTMDG 164
S G PR +L P R R WWR PT G
Sbjct: 28 SVEGEARPRATL--PLRCRRWWWRSEPTSRG 56
>02_05_0158 - 26362259-26362695,26363732-26363903
Length = 202
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +1
Query: 55 TQSSRCATTMLLRL*STMAPACARPVSPATT--RPAPSSRPSWVALATRXVMVGMGQKDS 228
T S+ ATT S+ P+ A P +P++ PSS P T G
Sbjct: 121 TVSAAAATTPTPTA-SSSPPSTATPATPSSDPGMDTPSSTPDATTTPTTTTTKSTGSTGG 179
Query: 229 YVGDEAQSKRGIL 267
G EA+S G+L
Sbjct: 180 ASGSEARSVMGLL 192
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +1
Query: 211 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 390
+ + DS + D Q K + +K+P G++ + W H Y V P+ V +T
Sbjct: 387 IARNDSIIVDICQRKGSVGQIKFPSLAGVVVALLFLLPKWTHGQYKSTLVCPDCRKVSVT 446
Query: 391 EAP 399
P
Sbjct: 447 FDP 449
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAV 161
+DV ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>03_06_0667 - 35405919-35406119,35406148-35406192
Length = 81
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 211 YRPSRPWWRGRPTM-DGKTARGASSPAK 131
+RPS WWRG P++ +G R A+S K
Sbjct: 3 WRPSPEWWRGDPSVGEGDWWRRAASLLK 30
>01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563
Length = 412
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 100 STMAPACARPVSPATTRPAPSSRPSWVALATRXVMVGMGQK 222
+T++ A A P + A P P+S S A A + G GQ+
Sbjct: 46 TTVSAASAAPAAVAPPPPPPASSSSSAAAAGKRARAGQGQQ 86
>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
Length = 516
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 109 APACARPVSPATTRPAPSSRPSWV 180
+PA A P SP T+ PAP PS V
Sbjct: 103 SPAPALPTSPETSIPAPPPPPSLV 126
>09_04_0004 - 13584730-13585227,13585429-13585929
Length = 332
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = -2
Query: 260 PLLLWAS---SPT*ESFWPIPTITXLVARATHDGREDGAGRVVAGETGLAHAGAIVDYKR 90
P + WA T W P +R + D G +AGET A A A + ++R
Sbjct: 161 PFVYWAEVGDGDTDHYCWQRPE-DMTTSRQAYRVDRDNPGSDLAGETAAALAAASIVFRR 219
Query: 89 SNIVVAHLEL 60
S+ +HL L
Sbjct: 220 SDPHYSHLLL 229
>05_01_0070 + 478435-478731,479041-479079
Length = 111
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 208 RPSRPWWRGRPTMDGKTARGASSPAKPALHMPE 110
RP PW+ P M K+AR ++ AK H P+
Sbjct: 37 RPREPWFLDTPEMREKSARHSALAAKYWEHDPK 69
>03_06_0145 - 31973924-31975837
Length = 637
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 250 SGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPEP 107
+ P PRR S R R WR RP +D ++ +P P M P
Sbjct: 404 TNPPPPRRRTS---RAPRLPWRYRPVIDEHKSKSGDAPPTPPAVMVSP 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,051,120
Number of Sequences: 37544
Number of extensions: 416524
Number of successful extensions: 1924
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -