Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_N22
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 315 2e-86
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 315 2e-86
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 315 2e-86
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 315 2e-86
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 315 2e-86
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 315 2e-86
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 315 2e-86
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 315 2e-86
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 315 2e-86
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 313 6e-86
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 307 5e-84
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 211 3e-55
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 178 2e-45
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 150 1e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 116 1e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 7e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 2e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 2e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 3e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.54
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.54
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.71
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.71
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.71
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.71
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 1.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 5.0
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 5.0
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.7
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 6.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 27 8.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 315 bits (774), Expect = 2e-86
Identities = 147/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 315 bits (774), Expect = 2e-86
Identities = 147/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 315 bits (773), Expect = 2e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 315 bits (773), Expect = 2e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 315 bits (773), Expect = 2e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 315 bits (773), Expect = 2e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 315 bits (773), Expect = 2e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 315 bits (773), Expect = 2e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 90 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 149
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 150 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQG 197
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 315 bits (773), Expect = 2e-86
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 313 bits (769), Expect = 6e-86
Identities = 145/151 (96%), Positives = 149/151 (98%)
Frame = +1
Query: 202 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 381
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 382 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 561
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 562 PIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
PIYEGYAL HAILRLDLAGRDLTDYLM ILT
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 151
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 307 bits (753), Expect = 5e-84
Identities = 141/152 (92%), Positives = 148/152 (97%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 378
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 558
VLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HT
Sbjct: 103 VLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT 162
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
VPIYEGYAL HAI RLDLAGRDLTDY+M ILT
Sbjct: 163 VPIYEGYALPHAIQRLDLAGRDLTDYMMKILT 194
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +3
Query: 75 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 211 bits (516), Expect = 3e-55
Identities = 92/152 (60%), Positives = 123/152 (80%), Gaps = 1/152 (0%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 375
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 376 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 555
PVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
Query: 556 TVPIYEGYALXHAILRLDLAGRDLTDYLMXIL 651
VPI +G+A+ HAI R+DLAGRD+T+YL +L
Sbjct: 166 AVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLL 197
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +3
Query: 75 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 191
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 178 bits (434), Expect = 2e-45
Identities = 87/173 (50%), Positives = 119/173 (68%), Gaps = 1/173 (0%)
Frame = +1
Query: 136 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 315
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 316 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 492
M +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVL 144
Query: 493 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALXHAILRLDLAGRDLTDYLMXIL 651
+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+ +L
Sbjct: 145 TLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLL 197
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 185
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 150 bits (363), Expect = 1e-36
Identities = 72/160 (45%), Positives = 101/160 (63%), Gaps = 9/160 (5%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 375
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 376 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVL 531
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 532 DSGDGVSHTVPIYEGYALXHAILRLDLAGRDLTDYLMXIL 651
DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLL 215
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 116 bits (279), Expect = 1e-26
Identities = 52/123 (42%), Positives = 82/123 (66%)
Frame = +1
Query: 283 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 462
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 463 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALXHAILRLDLAGRDLTDYLM 642
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 643 XIL 651
+L
Sbjct: 214 QML 216
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 78 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 327
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 318
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 327
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 69 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 199 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 327
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Frame = +1
Query: 217 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 390
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 391 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 558
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYL 639
G + +++R+D+ G+ LT+ L
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Frame = +1
Query: 217 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 390
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 391 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 558
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 559 VPIYEGYALXHAILRLDLAGRDLTDYL 639
G + +++R+D+ G+ LT+ L
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/102 (31%), Positives = 51/102 (50%)
Frame = +1
Query: 349 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 528
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 529 LDSGDGVSHTVPIYEGYALXHAILRLDLAGRDLTDYLMXILT 654
+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLS 366
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 548 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 453
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 100 STMAPACARPVSPATTRPAPSSRP 171
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.54
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 235 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 414
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 415 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 567
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 247 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 134
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -3
Query: 265 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 113
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 183 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 302
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 91 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 195
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 265 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAK 131
G C P P S P +P +P G P G +GAS+P +
Sbjct: 102 GCTGCCNPGPPGPGGS-PGKPGKPGKPGAPGAPGAAGKGASAPCE 145
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQG 197
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 250 SGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 134
+GP P P +P P G P G+ +RG P+
Sbjct: 176 AGPTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPS 214
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 247 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPEP 107
GP+ P+ + P +P +P G+P G+ + P P P P
Sbjct: 93 GPQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCP 139
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 265 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPE 110
G S +G P P P P G P G A+ SSP P P+
Sbjct: 177 GQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQ 228
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 265 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPE 110
G S +G P P P P G P G A+ SSP P P+
Sbjct: 177 GQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQ 228
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 265 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPE 110
G S +G P P P P G P G A+ SSP P P+
Sbjct: 177 GQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQ 228
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 247 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARG 149
GPR P P +P P G P G+ +RG
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRG 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,686,429
Number of Sequences: 27780
Number of extensions: 288597
Number of successful extensions: 1426
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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