Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_N21
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 30 6.3
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 30 6.3
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 8.3
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 30 8.3
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 30 8.3
BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein. 30 8.3
AY032950-1|AAK44211.1| 1865|Homo sapiens LTRPC7 protein. 30 8.3
AF346629-1|AAK19738.2| 1864|Homo sapiens channel-kinase 1 protein. 30 8.3
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 30 8.3
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +1
Query: 457 TGSKKGRRYVFRHQRYGSRGDHE--GRTGHRHDIHHQRCGVHSFNLYQFRMCDALADGA* 630
TG + G R + H YG RG HE G G R H G N +Q D + G
Sbjct: 333 TGGRGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGGGG 392
Query: 631 RHQ 639
+Q
Sbjct: 393 GYQ 395
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +1
Query: 457 TGSKKGRRYVFRHQRYGSRGDHE--GRTGHRHDIHHQRCGVHSFNLYQFRMCDALADGA* 630
TG + G R + H YG RG HE G G R H G N +Q D + G
Sbjct: 334 TGGRGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGGGG 393
Query: 631 RHQ 639
+Q
Sbjct: 394 GYQ 396
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 454 GTGSKKGRRYVFRHQRYGSRGDHEGRTGHRH 546
GTG G+R + R SR H G TG+RH
Sbjct: 799 GTGGSNGKRERYTENRGSSRHSH-GETGNRH 828
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 454 GTGSKKGRRYVFRHQRYGSRGDHEGRTGHRH 546
GTG G+R + R SR H G TG+RH
Sbjct: 780 GTGGSNGKRERYTENRGSSRHSH-GETGNRH 809
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 454 GTGSKKGRRYVFRHQRYGSRGDHEGRTGHRH 546
GTG G+R + R SR H G TG+RH
Sbjct: 680 GTGGSNGKRERYTENRGSSRHSH-GETGNRH 709
>BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein.
Length = 208
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 454 GTGSKKGRRYVFRHQRYGSRGDHEGRTGHRH 546
GTG G+R + R SR H G TG+RH
Sbjct: 69 GTGGSNGKRERYTENRGSSRHSH-GETGNRH 98
>AY032950-1|AAK44211.1| 1865|Homo sapiens LTRPC7 protein.
Length = 1865
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 359 AEWNSSNLYEKHDSTWKGKIRVNGNFIGRTNLVLEVKRGADTFSVTNGTVPVVITRVERV 538
A+WN +N Y+ H + V G I N++ R D +V P V+ + ++
Sbjct: 945 AKWNFANAYDNH-------VFVAGRLIYCLNIIFWYVRLLDFLAVNQQAGPYVM-MIGKM 996
Query: 539 IDTIFTTSVAVFIALIFINFG 601
+ +F + V +AL+ ++FG
Sbjct: 997 VANMF--YIVVIMALVLLSFG 1015
>AF346629-1|AAK19738.2| 1864|Homo sapiens channel-kinase 1 protein.
Length = 1864
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 359 AEWNSSNLYEKHDSTWKGKIRVNGNFIGRTNLVLEVKRGADTFSVTNGTVPVVITRVERV 538
A+WN +N Y+ H + V G I N++ R D +V P V+ + ++
Sbjct: 945 AKWNFANAYDNH-------VFVAGRLIYCLNIIFWYVRLLDFLAVNQQAGPYVM-MIGKM 996
Query: 539 IDTIFTTSVAVFIALIFINFG 601
+ +F + V +AL+ ++FG
Sbjct: 997 VANMF--YIVVIMALVLLSFG 1015
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 454 GTGSKKGRRYVFRHQRYGSRGDHEGRTGHRH 546
GTG G+R + R SR H G TG+RH
Sbjct: 799 GTGGSNGKRERYTENRGSSRHSH-GETGNRH 828
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,484,353
Number of Sequences: 237096
Number of extensions: 2143950
Number of successful extensions: 4107
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4091
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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