Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_N17
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81052-2|CAB02875.1|  244|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006677-4|AAF39949.1|  327|Caenorhabditis elegans Serpentine re...    29   3.8  
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    28   5.0  
U80443-6|AAK68201.1|  643|Caenorhabditis elegans Ferm domain (pr...    28   6.6  
U80443-5|AAD32269.1|  635|Caenorhabditis elegans Ferm domain (pr...    28   6.6  
U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical...    28   6.6  
Z77653-2|CAB01125.3|  383|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF047657-5|AAK18949.1|  335|Caenorhabditis elegans Serpentine re...    27   8.7  

>Z81052-2|CAB02875.1|  244|Caenorhabditis elegans Hypothetical
           protein D2023.3 protein.
          Length = 244

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -3

Query: 411 TTCIERRRPMGVVTMPDTAHPSGTTIKFIELIQEISDFSKYKT 283
           + CIE+   +G     DTAHP  + I+ I L +  ++ S++KT
Sbjct: 136 SVCIEKASSLG----SDTAHPPDSFIRIIGLDEFSTELSRHKT 174


>AC006677-4|AAF39949.1|  327|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 58 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +1

Query: 370 SHDTHWSPTFYASCEPSILYSLVTISLLNQYRTFICSSVFNGFSWRSPEAPVLTYVAEIT 549
           ++D +W+  F   C  SILYS +  SL+  +   +  S+ NG   ++    V T    +T
Sbjct: 139 NNDKYWNLIFIFFCLGSILYSCICNSLIPGH--IVEVSILNGTLTKTTYVGVYTVAVSVT 196


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +1

Query: 16   DWRTKKPHSESTALILSKLVIFIKTNGARHRSSWRWCNVCTLCIQKGFSHSSSPIFSCE 192
            DW  K+P S     ++ +LVI   +   +H S    CNVC +    G  +     F+C+
Sbjct: 3276 DWVKKEPQSIVWLAVMHRLVI---SESTKHASK---CNVCKMFPIIGIRYRCLTCFNCD 3328


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +1

Query: 16   DWRTKKPHSESTALILSKLVIFIKTNGARHRSSWRWCNVCTLCIQKGFSHSSSPIFSCE 192
            DW  K+P S     ++ +LVI   +   +H S    CNVC +    G  +     F+C+
Sbjct: 3276 DWVKKEPQSIVWLAVMHRLVI---SESTKHASK---CNVCKMFPIIGIRYRCLTCFNCD 3328


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +1

Query: 16   DWRTKKPHSESTALILSKLVIFIKTNGARHRSSWRWCNVCTLCIQKGFSHSSSPIFSCE 192
            DW  K+P S     ++ +LVI   +   +H S    CNVC +    G  +     F+C+
Sbjct: 3276 DWVKKEPQSIVWLAVMHRLVI---SESTKHASK---CNVCKMFPIIGIRYRCLTCFNCD 3328


>U80443-6|AAK68201.1|  643|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 4,
           isoform b protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 307 DFLDKFNKLDSRATGVCSIRHSHDTHWSPTFY-ASCEPSILYS 432
           +FL+K ++LD+ A    +I+  HDT   P +  ASC+  ++Y+
Sbjct: 215 EFLEKASQLDTYAFDPYTIKEPHDT--LPVYIGASCKGILIYT 255


>U80443-5|AAD32269.1|  635|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 4,
           isoform a protein.
          Length = 635

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 307 DFLDKFNKLDSRATGVCSIRHSHDTHWSPTFY-ASCEPSILYS 432
           +FL+K ++LD+ A    +I+  HDT   P +  ASC+  ++Y+
Sbjct: 207 EFLEKASQLDTYAFDPYTIKEPHDT--LPVYIGASCKGILIYT 247


>U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical
           protein T25G12.5 protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 578 LSRXXRRCGCVISATYVSTGASGDLQLNPLKTELHINVRYWLRSEIV 438
           LSR   +C  + S T  +     D QL   + E   NVR ++  E++
Sbjct: 2   LSRNLTKCTRLFSTTNKAMSTGMDFQLTADQAEFRANVRKFVADEVI 48


>AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical
           protein Y51A2D.18 protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 323 SINLIVVPLGCAVSGIVTTPIGRRRSMQVVNLPFFIAWLL 442
           S+ +  V  G  V G ++   GR+   QV +L   I WL+
Sbjct: 133 SVQMFGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLI 172


>Z77653-2|CAB01125.3|  383|Caenorhabditis elegans Hypothetical
           protein C13C12.2 protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 303 DFSKYKTSPSFGFSTAGISIVVKPKVMP*PSNRRF 199
           DF K K   +FGF    I + ++  V+  P+  RF
Sbjct: 68  DFKKIKVKQNFGFLAGEIGVTLQVPVLEGPAGIRF 102


>Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical
           protein B0001.7 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 130 VCTLCIQKGFSHSSSPIFSCERKEPSITGLWHDLGFY-DYTYSRC 261
           V T C++  F  S+SPIFS         G W  +G Y D T + C
Sbjct: 62  VFTSCVEVSFPRSNSPIFS-----NFTLGTWMIVGLYPDATVASC 101


>AF047657-5|AAK18949.1|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein241 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -3

Query: 204 RFFTLTAKN-WGRAVRKSFLYT 142
           RF+TL A+N W + VRK FL++
Sbjct: 122 RFYTLFAQNSWWKKVRKPFLFS 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,981,267
Number of Sequences: 27780
Number of extensions: 353690
Number of successful extensions: 926
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)