Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_N01
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   216   8e-57
U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z78063-2|CAB01503.2|  275|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical ...    27   10.0 

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  216 bits (528), Expect = 8e-57
 Identities = 101/184 (54%), Positives = 136/184 (73%), Gaps = 1/184 (0%)
 Frame = +1

Query: 40  KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 219
           K++K+ G      E  +SQAL++LETN D+++QL+ELYI   KE+EL NK +IIIYVP+P
Sbjct: 7   KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66

Query: 220 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 396
           +LKAF KI   LVRELEKKF G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+
Sbjct: 67  QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126

Query: 397 DAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLXXNXQTTIEHKVDTFQSVYKKLTGREXD 576
           DA L +LV+PAE+VG+RIRVKLDG ++ KVHL  + QT + HK+  F SVY+KLTG++  
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVT 186

Query: 577 LRVP 588
              P
Sbjct: 187 FEFP 190


>U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical
           protein F07F6.4 protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 104 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 214
           S+SK T      F SF  Q ++K  YT  S SSS  R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 126 VGVGFEFDQRLRDRGLEGIRLSTARFDDL 40
           V VGFE   RLRD+GL   +LS   +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550


>U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical
           protein C27D6.1 protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +1

Query: 19  KLSTMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 198
           K +  + K I+A   +     T  S+ L ELE       Q +E +  K++E+E+ NK+ +
Sbjct: 243 KANEKARKEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQLV 302


>Z78063-2|CAB01503.2|  275|Caenorhabditis elegans Hypothetical
           protein F45D3.2 protein.
          Length = 275

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 7   SLPXKLSTMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN 186
           SLP   ST++      S   + S  TS+ + LVE +       ++R + +TK +E  +  
Sbjct: 159 SLPITTSTITCS--SNSSPSSSSITTSVLRTLVEDDDADVHPNKVRPIQVTKEEEDLVRR 216

Query: 187 K-KSIIIYVPMPKLK 228
           K + ++  +P+ KL+
Sbjct: 217 KTQELLKSMPLQKLE 231


>U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical
           protein T19D12.7 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 327 LRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHIDD 199
           L+QD     K +MF    +F   DK  +D  + L+F+  + DD
Sbjct: 167 LQQDFRSFQKVWMFNKTEMFSADDKTFIDSNRSLEFQVLNEDD 209


>AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical
           protein Y18D10A.3 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 128 RSELVSSSTSACEIEVSKESASAPLALMIFVLIVDNFXG 12
           R+EL+ S    CE      +A+ P  L  F LIVD   G
Sbjct: 206 RNELMKSLVVQCETSSIPITATLPTNLQAFPLIVDALFG 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.133    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,969,985
Number of Sequences: 27780
Number of extensions: 232341
Number of successful extensions: 678
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)