Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_M11
         (523 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z81486-4|CAB03986.2|  430|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL132865-3|CAB60603.1|  310|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical
           protein ZC13.3 protein.
          Length = 732

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 147 GRFLSGAMQLHS*LIAILHSPKFHARKVLSVRLF 248
           G+F+S  +      IAIL SPKF+A + L+V LF
Sbjct: 592 GQFVSAILDAED--IAILESPKFNATRSLNVLLF 623


>Z81486-4|CAB03986.2|  430|Caenorhabditis elegans Hypothetical
           protein C53A5.5 protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 340 VISVIDRRNSHHYSVMFSCVLVXXVLTKFFRFLRPKIVFISNHRNSITRAFA 495
           ++S I  R     ++  S +L   +  +FF   R  ++  S H+++ TR  A
Sbjct: 133 ILSNIAERTRERVNIPISVLLTLPMFLRFFIVCRYMVLHSSQHQDTATRTIA 184


>AL132865-3|CAB60603.1|  310|Caenorhabditis elegans Hypothetical
           protein Y62E10A.4 protein.
          Length = 310

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = +1

Query: 250 VERLYLVLKSDYSYSDLCNSFYRAVSLLYGVISVIDRRNSHHYSVMFSCVLVXXVLTKFF 429
           ++RLY V      YS L NSFY A+ L     SV+   + + Y+     VLV    T + 
Sbjct: 104 LDRLYNVTYP-LRYSQLPNSFYIALFLFCVGFSVLITYSGYSYASDSEIVLVCLPPTAYT 162

Query: 430 RFLRPKIVFI-SNHRNSITRAFAFGNS 507
              + +I++I SN   +I   F +G +
Sbjct: 163 D--KSRIIWIGSNFIIAILVIFVYGGA 187


>Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical
           protein ZK270.1 protein.
          Length = 983

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/62 (24%), Positives = 24/62 (38%)
 Frame = +2

Query: 47  ILAFSDCVIKCFLPLEILYSEPKRILFRKEGARRPVLIGCNAVALLTYCNFAFAKVSCAE 226
           I+    CV+     L +      +I+        P+L    A+AL+  C   FA + C  
Sbjct: 322 IMCLCSCVLVMIRALYMHQENGYKIILAIMACLTPLLACATALALMFLCGVRFASILCVI 381

Query: 227 SF 232
            F
Sbjct: 382 PF 383


>Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical
           protein ZK270.1 protein.
          Length = 983

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/62 (24%), Positives = 24/62 (38%)
 Frame = +2

Query: 47  ILAFSDCVIKCFLPLEILYSEPKRILFRKEGARRPVLIGCNAVALLTYCNFAFAKVSCAE 226
           I+    CV+     L +      +I+        P+L    A+AL+  C   FA + C  
Sbjct: 322 IMCLCSCVLVMIRALYMHQENGYKIILAIMACLTPLLACATALALMFLCGVRFASILCVI 381

Query: 227 SF 232
            F
Sbjct: 382 PF 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,112,909
Number of Sequences: 27780
Number of extensions: 212435
Number of successful extensions: 437
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)