Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_M09
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0446 - 8567436-8567567,8567649-8567768,8569837-8569914,857... 107 6e-24
01_07_0331 + 42804385-42804659,42806175-42806340,42806424-428065... 104 5e-23
10_08_0323 + 16743358-16743566,16744536-16744704,16744834-167449... 99 1e-21
02_04_0430 + 22834405-22834839 29 2.4
02_01_0076 + 540182-540583,541266-541475,541557-542018,542112-54... 28 4.1
01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490... 28 4.1
11_08_0035 - 27838495-27838655,27838750-27838897,27838987-278391... 24 4.6
02_02_0106 + 6814391-6817007,6817086-6817462 28 5.5
10_08_0455 - 18057525-18057791,18058077-18058313,18058568-180587... 27 9.6
10_08_0391 + 17486109-17486210,17487032-17487129,17487331-174873... 27 9.6
09_02_0154 + 5055946-5058721,5058754-5058770 27 9.6
05_06_0267 - 26784861-26784896,26785324-26785404,26785530-267857... 27 9.6
04_04_1313 - 32572594-32573793,32573827-32573832 27 9.6
04_04_0439 - 25207950-25209629 27 9.6
>03_02_0446 -
8567436-8567567,8567649-8567768,8569837-8569914,
8570018-8570122,8570214-8570306,8570464-8570619
Length = 227
Score = 107 bits (257), Expect = 6e-24
Identities = 46/105 (43%), Positives = 71/105 (67%)
Frame = +3
Query: 186 RNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGG 365
R++++E+N+ ++ F TVE FW Y H+ P L D +FK+GIRP+WED AN+ GG
Sbjct: 67 RSQSYEDNIKKIVDFSTVESFWVCYCHLTRPVSLPSPTDLHLFKEGIRPLWEDPANRSGG 126
Query: 366 RWLISLEKKQRFTDLDRFWLDVVLLLIGENFENSDEICGAVVNVR 500
+W+I +K T RFW D+VL+L+G+ + SD++CG V++VR
Sbjct: 127 KWIIRFKK----TVSGRFWEDLVLVLVGDQLDYSDDVCGVVLSVR 167
>01_07_0331 +
42804385-42804659,42806175-42806340,42806424-42806549,
42807142-42807207,42807645-42807698,42808843-42809019,
42809100-42809102
Length = 288
Score = 104 bits (249), Expect = 5e-23
Identities = 58/151 (38%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Frame = +3
Query: 99 NSNAEVPPVIFDQAPXYKTSGVSGFYDNDRNK----TWEENLIELTTFDTVEDFWRLYHH 266
+ + PP AP + ++DN + K TW ++ + TF TVEDFW LY++
Sbjct: 37 DDSGHAPPQANPAAPHPLEHAWTFWFDNPQGKSKQATWGSSIRPIHTFSTVEDFWSLYNN 96
Query: 267 IKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLI 446
I PS+L G D+ FK I P WED GG+W S + + D WL +L +I
Sbjct: 97 IHHPSKLVVGADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKS----DTMWLHTLLAMI 152
Query: 447 GENFENSDEICGAVVNVRPKVIN-CYWTADA 536
GE F+ DEICGAVV+VR K WT +A
Sbjct: 153 GEQFDYGDEICGAVVSVRGKQERIAIWTKNA 183
>10_08_0323 +
16743358-16743566,16744536-16744704,16744834-16744959,
16745813-16745878,16745997-16746047
Length = 206
Score = 99 bits (238), Expect = 1e-21
Identities = 44/103 (42%), Positives = 63/103 (61%)
Frame = +3
Query: 198 WEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLI 377
W +L + TFDTVE+FW LY I PS++ D+ +FK G+ P WED GG+W +
Sbjct: 52 WGTSLRKAYTFDTVEEFWGLYDQIFRPSKVTVNADFHLFKAGVEPKWEDPECANGGKWTV 111
Query: 378 SLEKKQRFTDLDRFWLDVVLLLIGENFENSDEICGAVVNVRPK 506
+K T L+ WL+ ++ LIGE F+ S+EICG V +VR +
Sbjct: 112 PCSRK---TTLENMWLETLMALIGEQFDESEEICGVVASVRQR 151
>02_04_0430 + 22834405-22834839
Length = 144
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 388 FSRLISHLPPILLASSSHIGRM 323
FSR+ S LPP L + SHIGR+
Sbjct: 95 FSRVGSPLPPTLSSGGSHIGRI 116
>02_01_0076 +
540182-540583,541266-541475,541557-542018,542112-542222,
542309-542488,543083-543367,544581-544701,544802-544923
Length = 630
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 262 IILSYRQ--NFAKVMTMQYSSKAFVLCGKTMLTRWEEDGLSVLRKNNALL 405
++LS+ Q A ++ M + + F L GKT + W + S ++KNN L
Sbjct: 351 VLLSHAQMVELANILDMYFEDQ-FTLPGKTFYSNWNSEP-SKIKKNNGYL 398
>01_05_0104 +
18148396-18148642,18148797-18148886,18148972-18149072,
18149174-18149287,18149381-18149462,18149592-18149659,
18149747-18149806,18149885-18150009,18150663-18150861,
18150942-18151073,18151152-18151244,18151360-18152244,
18152339-18152664,18153003-18153341,18153911-18153996,
18154054-18154139
Length = 1010
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 285 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDL-DRFWLD 428
LR ++ + G R + E++ ++ +W + LE KQR L +R W D
Sbjct: 845 LRNEREFLARRMGSR-LTEEERERLFIKWQVPLEAKQRKLQLVNRLWTD 892
>11_08_0035 -
27838495-27838655,27838750-27838897,27838987-27839192,
27839291-27839972,27840074-27840247,27840963-27841181,
27841281-27841400,27841540-27841680,27841762-27841801,
27841969-27842129,27842506-27842589,27842659-27842721,
27842808-27842885,27842980-27842984,27843228-27843313,
27843354-27843544,27844089-27844166,27844255-27844365,
27844757-27844927,27845026-27845198,27845748-27845928
Length = 1090
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/27 (25%), Positives = 17/27 (62%)
Frame = +1
Query: 256 CTIILSYRQNFAKVMTMQYSSKAFVLC 336
CT++ +R++ +++T+Q+S C
Sbjct: 290 CTLVTRHRKHADEILTLQFSQPDGTYC 316
Score = 22.6 bits (46), Expect(2) = 4.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 322 AFVLCGKTMLTRWEEDGLSVLRKN 393
A L GK +T WE+D +RKN
Sbjct: 352 ALALNGKD-ITEWEDDTDEYMRKN 374
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 475 ISSEFSKFSPIKRRTTSNQNLSKSVKR--CFFSRLISHLPPILLASSSHIGRMP 320
+ SE K SP+ SN NLS + CF +L S I++ ++S G++P
Sbjct: 354 LPSELGKHSPLANLEVSNNNLSGELPEGLCFNRKLYS----IVVFNNSFSGKLP 403
>10_08_0455 -
18057525-18057791,18058077-18058313,18058568-18058706,
18058835-18059053,18059672-18060047,18060379-18060547
Length = 468
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 533 ISCPIAIYYFWSDINNSTTNL 471
ISCP I+ W DI N+ L
Sbjct: 363 ISCPAKIFRLWDDIGNAKEGL 383
>10_08_0391 +
17486109-17486210,17487032-17487129,17487331-17487361,
17487655-17487707,17489254-17489402,17489828-17489898,
17489988-17490131,17490249-17490309,17492180-17492265,
17492839-17492926,17494012-17494142,17494266-17494394
Length = 380
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 340 KTMLTRWEEDGLSVLRKNNALLI*IG 417
KT++T EDG S+L +NN LL+ IG
Sbjct: 71 KTLMT--PEDGGSILCRNNVLLVLIG 94
>09_02_0154 + 5055946-5058721,5058754-5058770
Length = 930
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 456 NFHQLKEEPHLTRTYLNQ*SVVFSQD 379
N QLK E H+ + +L Q + FSQD
Sbjct: 42 NMRQLKIEFHVMKAFLTQQQIHFSQD 67
>05_06_0267 -
26784861-26784896,26785324-26785404,26785530-26785702,
26785780-26785938,26786199-26786328,26786447-26786609,
26787027-26787109,26787605-26787664,26787819-26787940,
26789126-26789275,26789354-26789546,26790156-26790393,
26791240-26791320,26791403-26791647
Length = 637
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +3
Query: 135 QAPXYKTSGVSGFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVF 314
Q+ Y +S + +Y+ D N + +LI+ T+ + Y H+ + L + F
Sbjct: 169 QSNEYASSALD-YYNKDENNKIQYSLIKALKSSTIREKGEKYGHVNFIASL-DSKEELFF 226
Query: 315 KQGIRPMWEDDANKMGGRWLISLEKKQR 398
+ W+ M ++SLE+K+R
Sbjct: 227 AE---VCWDPKNYDMVPTCIVSLEEKRR 251
>04_04_1313 - 32572594-32573793,32573827-32573832
Length = 401
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -1
Query: 358 ILLASSSHIGRMPCLNTA*S*PWRSSDGSLI*WYNLQKSSTVSNVVNSIRFSSHVLFRSL 179
+LL S H+ ++ L A +S+DG+ + +N T+ V+ + S H L R+L
Sbjct: 241 VLLVPSEHVTKIKHLTDAQEEELKSADGNQVNSFNRIIRKTIHPVIGD-KGSMHALIRAL 299
>04_04_0439 - 25207950-25209629
Length = 559
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 249 WRLYHHIKLPSELRQGHDYAVFKQGIRPMWE 341
WR HH+ R GHD + +RPM E
Sbjct: 156 WRALHHVLK----RTGHDVTAYLDALRPMEE 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,840,429
Number of Sequences: 37544
Number of extensions: 269809
Number of successful extensions: 623
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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