Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_M07
         (392 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535...    29   1.8  
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468...    27   4.1  
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173...    27   4.1  

>08_01_0609 +
           5345761-5345862,5346808-5346871,5346958-5350191,
           5350375-5350589,5351123-5351393,5351986-5352161,
           5352287-5352394,5352821-5352930,5354291-5354393,
           5354658-5354828,5354952-5355080,5355322-5355504,
           5355612-5355701,5355823-5355934,5356100-5356227,
           5357769-5357825,5357872-5357923,5358318-5358393,
           5358860-5358950,5359046-5359224,5359563-5359681,
           5359783-5359880
          Length = 1955

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 217 KYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEA 348
           K++   L N S    HE+VD+ D  +  E+  E + L  AL+ A
Sbjct: 460 KFEVDLLGNTSSNSTHEEVDVVDEAQTGEATFEVDLLGNALSSA 503


>07_03_1258 +
           25244863-25245282,25246419-25246568,25246665-25246877,
           25246979-25247068,25247311-25247424,25247881-25248150,
           25248251-25248407,25248691-25248741,25248742-25248819,
           25249357-25249457,25249832-25250002,25250136-25250210,
           25251527-25251793
          Length = 718

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 170 ARSYILEKDYYLFYTVNINLHRYKICLKK 256
           A S + E DY+   T N  LH +  CL+K
Sbjct: 360 ALSELTEGDYFNIITFNDELHSFSSCLEK 388


>03_01_0219 +
           1731267-1731728,1732148-1732235,1732330-1732417,
           1732528-1732573,1732687-1732785,1734363-1734431,
           1735706-1736036,1736123-1736256,1736400-1737251
          Length = 722

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 169 GS*LYFRKRLLFILHRKYKPSSLQNMSEEECHEDV-DISDITEH 297
           G+ L  +K LLFIL R  K  +    SE   HE++ D  +I EH
Sbjct: 195 GTPLPDKKLLLFILDRLQKKDTYGVFSEPVDHEELPDYHEIIEH 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,564,451
Number of Sequences: 37544
Number of extensions: 99822
Number of successful extensions: 256
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)