Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_M07
         (392 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538148-1|CAD98035.1|  710|Homo sapiens hypothetical protein pr...    29   7.2  
BC055426-1|AAH55426.1|  710|Homo sapiens Bardet-Biedl syndrome 1...    29   7.2  
AK123553-1|BAC85644.1|  710|Homo sapiens protein ( Homo sapiens ...    29   7.2  

>BX538148-1|CAD98035.1|  710|Homo sapiens hypothetical protein
           protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 250 EEECHEDVDISDITEHSESYLENEHLKFALTEATEADNN 366
           +EECHE V IS      ES      +   L EA +A NN
Sbjct: 41  DEECHESVLISSTVRLLESLDLTSAVGQLLNEAVQAQNN 79


>BC055426-1|AAH55426.1|  710|Homo sapiens Bardet-Biedl syndrome 12
           protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 250 EEECHEDVDISDITEHSESYLENEHLKFALTEATEADNN 366
           +EECHE V IS      ES      +   L EA +A NN
Sbjct: 41  DEECHESVLISSTVRLLESLDLTSAVGQLLNEAVQAQNN 79


>AK123553-1|BAC85644.1|  710|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41559 fis, clone CTONG1000087. ).
          Length = 710

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 250 EEECHEDVDISDITEHSESYLENEHLKFALTEATEADNN 366
           +EECHE V IS      ES      +   L EA +A NN
Sbjct: 41  DEECHESVLISSTVRLLESLDLTSAVGQLLNEAVQAQNN 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,788,639
Number of Sequences: 237096
Number of extensions: 626881
Number of successful extensions: 1397
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)