Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_M07
         (392 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical...    28   2.1  
AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protei...    26   8.4  
AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN phosphat...    26   8.4  
AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.     26   8.4  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    26   8.4  
AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dau...    26   8.4  

>AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical
           protein H20J04.1 protein.
          Length = 843

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 220 YKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNXL 372
           YK   L  +S  +    V IS    +  SYLE+ H    + + T AD N L
Sbjct: 251 YKKVDLTRVSATQVGTGVAISPFFSNVLSYLESSHAIKFIEKLTNADKNTL 301


>AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protein
           protein.
          Length = 962

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 7/37 (18%), Positives = 21/37 (56%)
 Frame = +1

Query: 205 ILHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 315
           + H  Y P++  NM  ++ H D ++    + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804


>AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN
           phosphatidylinositol 3' phosphatasehomolog DAF-18
           protein.
          Length = 962

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 7/37 (18%), Positives = 21/37 (56%)
 Frame = +1

Query: 205 ILHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 315
           + H  Y P++  NM  ++ H D ++    + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804


>AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.
          Length = 962

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 7/37 (18%), Positives = 21/37 (56%)
 Frame = +1

Query: 205 ILHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 315
           + H  Y P++  NM  ++ H D ++    + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 115  KDYT*CILFVNFGLKDYIGS*LYFRKRLLFILHRKYKPSSLQ 240
            K Y+     + F L  Y+ + LY R +L   L  KY P+SL+
Sbjct: 4047 KSYSTLQTLITFNLDQYMRTNLYPRPKLNTDLLGKYDPNSLR 4088


>AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dauer
           formation protein 18 protein.
          Length = 962

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 7/37 (18%), Positives = 21/37 (56%)
 Frame = +1

Query: 205 ILHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLE 315
           + H  Y P++  NM  ++ H D ++    + ++++++
Sbjct: 768 LFHESYHPNTAGNMLRQDYHTDSEVKIAEQEAKAFVD 804


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,549,397
Number of Sequences: 27780
Number of extensions: 114786
Number of successful extensions: 310
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)