Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_L23
         (495 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    67   8e-12
03_05_0012 + 19702264-19702459,19702478-19702572                       28   3.6  
05_01_0203 + 1459600-1460010                                           28   4.7  
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    27   8.3  
05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878           27   8.3  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 66.9 bits (156), Expect = 8e-12
 Identities = 38/92 (41%), Positives = 46/92 (50%)
 Frame = +3

Query: 129 LPXTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXX 308
           +P T EKI+T++KAA + VE YWPGLFAK LE  +V DLI ++GSG              
Sbjct: 20  IPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLILSVGSG-GGAAPVAAAAAPA 78

Query: 309 XXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 404
                                SDDDMGF LFD
Sbjct: 79  AGGGAAAAPAAEEKKEEAKEESDDDMGFSLFD 110


>03_05_0012 + 19702264-19702459,19702478-19702572
          Length = 96

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +2

Query: 98  YSALILVD--DDVAXNW*ENFHH 160
           Y+A +LVD   D+A NW  N HH
Sbjct: 64  YAACVLVDGASDIAINWSGNMHH 86


>05_01_0203 + 1459600-1460010
          Length = 136

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
 Frame = +2

Query: 2   RTQTCLFSLELRPTATCTFKLKMVSKAELACVYSALILVDDDV--AXNW*ENFHHLESGG 175
           RT TC       P    T     ++ A L    S L L DDD     N   +    E G 
Sbjct: 38  RTVTCSMIKVPNPHTVVTHSKDSIASASLLAT-SPLFLQDDDDDDGENVIGDLVSAEDGS 96

Query: 176 CRCRAILARSVR 211
           CRC+A   + +R
Sbjct: 97  CRCKAHSVQPLR 108


>11_01_0450 -
           3487464-3487844,3487883-3488268,3488883-3489033,
           3489132-3491102,3492090-3492149,3492240-3492436,
           3492678-3492963
          Length = 1143

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 50  CTFKLKMVSKA--ELACVYSALILVDDDVAXNW*ENFHHLESGGCRCRAILARSV 208
           CT K ++  +   EL+        VDDDV  +  EN   + SGG + R  L +S+
Sbjct: 692 CTSKRRIHRQEPNELSAKSKVCHAVDDDVFYSDKENLTPISSGGIKARRCLPKSL 746


>05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878
          Length = 402

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -1

Query: 204 DLANMALHLQPPLSRWWKFSHQLXATSSSTRMRAE*THANSAFDTIFSLNVQ 49
           D   + L   PP+     F     A  S T +    +H N  +DT+ SLNV+
Sbjct: 209 DHTRIKLGKSPPVESENVFLQGWPALRSQTSVWGHISHTNRRYDTLTSLNVK 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,590,170
Number of Sequences: 37544
Number of extensions: 183094
Number of successful extensions: 460
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)