Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_L22
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   154   4e-38
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   1.5  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  154 bits (374), Expect = 4e-38
 Identities = 69/85 (81%), Positives = 77/85 (90%)
 Frame = +3

Query: 57  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
           MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60

Query: 237 TCQVAYSRIEGDHIVCAAYSHELPR 311
             Q+AYS+IEGD +V +AYSHELPR
Sbjct: 61  VAQLAYSKIEGDVVVASAYSHELPR 85



 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 313 YGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPGAFRC 489
           YG+KVGLTNYAAAY+TG                          +YNVE   D  P  F+ 
Sbjct: 86  YGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKA 143

Query: 490 YLDVGLARTTTGARVFGAMKGAVDGGLNV 576
            LD+GLARTTTG+++F  MKG  DGG+NV
Sbjct: 144 VLDIGLARTTTGSKIFAVMKGVADGGINV 172


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 186 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHELPRL 314
           YN P+YR +++L  K   C+     + GD++   +CA +  EL +L
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETELHKL 591


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 291  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 178
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 291  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 178
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,975,578
Number of Sequences: 27780
Number of extensions: 289719
Number of successful extensions: 778
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)