Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_L14
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 162 1e-40
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 162 1e-40
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 162 1e-40
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 162 1e-40
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 161 5e-40
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 161 5e-40
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 158 2e-39
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 158 2e-39
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 157 6e-39
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 156 1e-38
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 155 2e-38
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 151 4e-37
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 151 4e-37
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 151 5e-37
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 5e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 81 8e-16
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 81 8e-16
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 81 8e-16
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 78 4e-15
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 66 1e-11
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 66 1e-11
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 47 1e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 47 1e-05
U14634-1|AAA21559.1| 222|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC084152-8|AAK39317.1| 541|Caenorhabditis elegans Hypothetical ... 27 7.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 162 bits (394), Expect = 1e-40
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDI 219
Query: 293 ERPTYTNLNRLIGQIVSS 346
ERP+YTNLNRLIGQIVSS
Sbjct: 220 ERPSYTNLNRLIGQIVSS 237
Score = 102 bits (245), Expect = 2e-22
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL T++PVISAEKAYHEQLSVAEITN CFEP NQMVKC PRHGKYMA C+L+
Sbjct: 267 FPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLF 319
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDLTEFQTNLVPYPRIHFP
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 268
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 162 bits (394), Expect = 1e-40
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDI
Sbjct: 159 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDI 218
Query: 293 ERPTYTNLNRLIGQIVSS 346
ERP+YTNLNRLIGQIVSS
Sbjct: 219 ERPSYTNLNRLIGQIVSS 236
Score = 102 bits (245), Expect = 2e-22
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL T++PVISAEKAYHEQLSVAEITN CFEP NQMVKC PRHGKYMA C+L+
Sbjct: 266 FPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLF 318
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDLTEFQTNLVPYPRIHFP
Sbjct: 237 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 267
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 162 bits (394), Expect = 1e-40
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDI 219
Query: 293 ERPTYTNLNRLIGQIVSS 346
ERP+YTNLNRLIGQIVSS
Sbjct: 220 ERPSYTNLNRLIGQIVSS 237
Score = 102 bits (245), Expect = 2e-22
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL T++PVISAEKAYHEQLSVAEITN CFEP NQMVKC PRHGKYMA C+L+
Sbjct: 267 FPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLF 319
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDLTEFQTNLVPYPRIHFP
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 268
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 162 bits (394), Expect = 1e-40
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDI 219
Query: 293 ERPTYTNLNRLIGQIVSS 346
ERP+YTNLNRLIGQIVSS
Sbjct: 220 ERPSYTNLNRLIGQIVSS 237
Score = 102 bits (245), Expect = 2e-22
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL T++PVISAEKAYHEQLSVAEITN CFEP NQMVKC PRHGKYMA C+L+
Sbjct: 267 FPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLF 319
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDLTEFQTNLVPYPRIHFP
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 268
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 161 bits (390), Expect = 5e-40
Identities = 72/78 (92%), Positives = 77/78 (98%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDV 217
Query: 293 ERPTYTNLNRLIGQIVSS 346
ERP+YTNLNR+I Q+VSS
Sbjct: 218 ERPSYTNLNRIISQVVSS 235
Score = 100 bits (240), Expect = 7e-22
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL Y P+ISAEKAYHE LSV++ITN+CFEPANQMVKC PRHGKYMA C+LY
Sbjct: 265 FPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLY 317
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 236 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 266
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 161 bits (390), Expect = 5e-40
Identities = 72/78 (92%), Positives = 77/78 (98%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDV 217
Query: 293 ERPTYTNLNRLIGQIVSS 346
ERP+YTNLNR+I Q+VSS
Sbjct: 218 ERPSYTNLNRIISQVVSS 235
Score = 100 bits (240), Expect = 7e-22
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL Y P+ISAEKAYHE LSV++ITN+CFEPANQMVKC PRHGKYMA C+LY
Sbjct: 265 FPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLY 317
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 236 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 266
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 158 bits (384), Expect = 2e-39
Identities = 70/78 (89%), Positives = 77/78 (98%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD+
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDV 217
Query: 293 ERPTYTNLNRLIGQIVSS 346
+RP+YTNLNR+I Q+VSS
Sbjct: 218 DRPSYTNLNRIISQVVSS 235
Score = 97.1 bits (231), Expect = 8e-21
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL +Y P+ISAEKAYHE LSV +ITN+CFEPANQMVKC PR+GKYMA C+LY
Sbjct: 265 FPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLY 317
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 236 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 266
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 158 bits (384), Expect = 2e-39
Identities = 70/78 (89%), Positives = 77/78 (98%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD+
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDV 217
Query: 293 ERPTYTNLNRLIGQIVSS 346
+RP+YTNLNR+I Q+VSS
Sbjct: 218 DRPSYTNLNRIISQVVSS 235
Score = 97.1 bits (231), Expect = 8e-21
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL +Y P+ISAEKAYHE LSV +ITN+CFEPANQMVKC PR+GKYMA C+LY
Sbjct: 265 FPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLY 317
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 236 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 266
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 157 bits (381), Expect = 6e-39
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL +
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSV 217
Query: 293 ERPTYTNLNRLIGQIVSS 346
+RP+YTNLNR+I Q+VSS
Sbjct: 218 DRPSYTNLNRIISQVVSS 235
Score = 98.3 bits (234), Expect = 4e-21
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL Y P+ISA+KAYHE LSV +ITN+CFEPANQMVKC PRHGKYMA C+LY
Sbjct: 265 FPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLY 317
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 236 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 266
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 156 bits (378), Expect = 1e-38
Identities = 69/78 (88%), Positives = 75/78 (96%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKKSKLEF IYPAPQVST++VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLD+
Sbjct: 165 DYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDL 224
Query: 293 ERPTYTNLNRLIGQIVSS 346
RPTYTNLNRLI Q++SS
Sbjct: 225 ARPTYTNLNRLIAQVISS 242
Score = 100 bits (240), Expect = 7e-22
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL TYAP+ISAEKAYHEQ++VAEIT CFEP QMVKC PR GKYMACC+LY
Sbjct: 272 FPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLY 324
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
+TASLRFDGALNVDLTEFQTNLVPYPRIHFP
Sbjct: 243 VTASLRFDGALNVDLTEFQTNLVPYPRIHFP 273
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 155 bits (376), Expect = 2e-38
Identities = 69/78 (88%), Positives = 75/78 (96%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKKSKLEF+IYPAPQV TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL +
Sbjct: 158 DYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSV 217
Query: 293 ERPTYTNLNRLIGQIVSS 346
+RP+YTNLNR+I Q+VSS
Sbjct: 218 DRPSYTNLNRIISQVVSS 235
Score = 98.3 bits (234), Expect = 4e-21
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL Y P+ISA+KAYHE LSV +ITN+CFEPANQMVKC PRHGKYMA C+LY
Sbjct: 265 FPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLY 317
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 236 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 266
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 151 bits (366), Expect = 4e-37
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+
Sbjct: 166 EYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDL 225
Query: 293 ERPTYTNLNRLIGQIVSS 346
RPTYTNLNRL+ QI+SS
Sbjct: 226 ARPTYTNLNRLVAQIISS 243
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPLVTYAP++SAE+A HEQ +V+++T+ACFEP QMVKC PR GKYMA C+LY
Sbjct: 273 FPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLY 325
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRF+GALNVDLTEFQTNLVPYPRIHFP
Sbjct: 244 ITASLRFEGALNVDLTEFQTNLVPYPRIHFP 274
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 151 bits (366), Expect = 4e-37
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+
Sbjct: 138 EYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDL 197
Query: 293 ERPTYTNLNRLIGQIVSS 346
RPTYTNLNRL+ QI+SS
Sbjct: 198 ARPTYTNLNRLVAQIISS 215
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPLVTYAP++SAE+A HEQ +V+++T+ACFEP QMVKC PR GKYMA C+LY
Sbjct: 245 FPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLY 297
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRF+GALNVDLTEFQTNLVPYPRIHFP
Sbjct: 216 ITASLRFEGALNVDLTEFQTNLVPYPRIHFP 246
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 151 bits (365), Expect = 5e-37
Identities = 66/78 (84%), Positives = 74/78 (94%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+YGKKSKLEF+IYPAPQ+ST+VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL +
Sbjct: 157 EYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRV 216
Query: 293 ERPTYTNLNRLIGQIVSS 346
RPTY NLNR+I Q+VSS
Sbjct: 217 SRPTYNNLNRIISQVVSS 234
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPLV Y P+IS+ A+HE LSV EIT +CFE +NQMVKC P+HGKYMA C+LY
Sbjct: 264 FPLVAYNPLISS--AHHEFLSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLY 314
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 235 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 265
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 142 bits (343), Expect = 2e-34
Identities = 62/78 (79%), Positives = 74/78 (94%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
++GKKSKLEF++YPAPQVST+VVEPYNSILTTHTTLE SDC+FMVDNEAIYD+CR+ L +
Sbjct: 163 EFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHV 222
Query: 293 ERPTYTNLNRLIGQIVSS 346
ERP+Y+NLNRLI Q+VSS
Sbjct: 223 ERPSYSNLNRLIAQVVSS 240
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPL TYAPVISA++A+HE LSV +IT+ CFE ANQMVKC P GKYMA C+LY
Sbjct: 270 FPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLY 322
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDL EFQTNLVPYPRIHFP
Sbjct: 241 ITASLRFDGALNVDLNEFQTNLVPYPRIHFP 271
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (324), Expect = 5e-32
Identities = 57/78 (73%), Positives = 72/78 (92%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
DYGKK+KLEF+IYPAPQ+ST++VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I + NL +
Sbjct: 160 DYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGV 219
Query: 293 ERPTYTNLNRLIGQIVSS 346
PTYT+LNRL+ Q+VSS
Sbjct: 220 RSPTYTHLNRLLAQVVSS 237
Score = 107 bits (257), Expect = 6e-24
Identities = 45/53 (84%), Positives = 50/53 (94%)
Frame = +1
Query: 436 FPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
FPLVTYAP+ISAEKAYHEQLSV+EITN CFEP +QMVKC PR+GKYMACC+LY
Sbjct: 267 FPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLY 319
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 440
ITASLRFDGALNVDLTEFQTNLVPYPRIHFP
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFP 268
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 81.8 bits (193), Expect = 3e-16
Identities = 34/77 (44%), Positives = 52/77 (67%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+Y + + F++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L +
Sbjct: 158 EYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 217
Query: 293 ERPTYTNLNRLIGQIVS 343
PTY +LN L+ +S
Sbjct: 218 TTPTYGDLNHLVSMTMS 234
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 451 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
+AP+ S + L+V E+T F+ N M C PRHG+Y+ ++
Sbjct: 270 FAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHF 437
+T LRF G LN DL + N+VP+PR+HF
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 265
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 80.6 bits (190), Expect = 8e-16
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+Y + F++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L +
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 217
Query: 293 ERPTYTNLNRLIGQIVS 343
PTY +LN L+ +S
Sbjct: 218 SNPTYGDLNHLVSVTMS 234
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHF 437
+T LRF G LN DL + N+VP+PR+HF
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 265
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 451 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
+AP+ + + L+VAE+T F+ N M C PRHG+Y+ ++
Sbjct: 270 FAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 80.6 bits (190), Expect = 8e-16
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+Y + F++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L +
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKL 217
Query: 293 ERPTYTNLNRLIGQIVS 343
PTY +LN L+ +S
Sbjct: 218 TTPTYGDLNHLVSATMS 234
Score = 47.2 bits (107), Expect = 9e-06
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 451 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
+AP+ S + ++V E+T CF+ N M C PRHG+Y+ ++
Sbjct: 270 FAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIF 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHF 437
+T LRF G LN DL + N+VP+PR+HF
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 265
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 80.6 bits (190), Expect = 8e-16
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+Y + F++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L +
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKL 217
Query: 293 ERPTYTNLNRLIGQIVS 343
PTY +LN L+ +S
Sbjct: 218 TTPTYGDLNHLVSATMS 234
Score = 47.2 bits (107), Expect = 9e-06
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 451 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
+AP+ S + ++V E+T CF+ N M C PRHG+Y+ ++
Sbjct: 270 FAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIF 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHF 437
+T LRF G LN DL + N+VP+PR+HF
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 265
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+Y + F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L +
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKL 217
Query: 293 ERPTYTNLNRLIGQIVS 343
PTY +LN L+ +S
Sbjct: 218 TNPTYGDLNHLVSLTMS 234
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHF 437
+T LRF G LN DL + N+VP+PR+HF
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 265
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 451 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
+AP+ + + L+VAE+T F+ N M C PRHG+Y+ ++
Sbjct: 270 FAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 78.2 bits (184), Expect = 4e-15
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +2
Query: 140 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 319
F++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 167 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLN 226
Query: 320 RLIGQIVS 343
L+ +S
Sbjct: 227 HLVSLTMS 234
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 348 ITASLRFDGALNVDLTEFQTNLVPYPRIHF 437
+T LRF G LN DL + N+VP+PR+HF
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVPFPRLHF 265
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 451 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCXPRHGKYMACCMLY 594
+AP+ + + L+VAE+T F+ N M C PRHG+Y+ ++
Sbjct: 270 FAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMF 317
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 66.5 bits (155), Expect = 1e-11
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+Y K+ +I P+ +VS VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKL 217
Query: 293 E-RPTYTNLNRLIGQIVS 343
E R TY +LN L +S
Sbjct: 218 ENRVTYGDLNHLASLALS 235
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 66.5 bits (155), Expect = 1e-11
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +2
Query: 113 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+Y K+ +I P+ +VS VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKL 217
Query: 293 E-RPTYTNLNRLIGQIVS 343
E R TY +LN L +S
Sbjct: 218 ENRVTYGDLNHLASLALS 235
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 116 YGKKSKLEFAIYPAPQVST-AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+ KK ++++ ST VV PYN +L+ +E+ D ++DN A++ +
Sbjct: 163 FPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKT 222
Query: 293 ERPTYTNLNRLIGQIVSSNHCFFEIRRRSECGPHRVPD*LGALPPYPLSHW 445
+ PT+ ++N L+ +I+S++ + + C R D L P+P H+
Sbjct: 223 DTPTFDHINSLVARIMSTSTAPYRF-NSAMCPSIRYLD----LAPFPPMHF 268
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 116 YGKKSKLEFAIYPAPQVST-AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 292
+ KK ++++ ST VV PYN +L+ +E+ D ++DN A++ +
Sbjct: 163 FPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKT 222
Query: 293 ERPTYTNLNRLIGQIVSSNHCFFEIRRRSECGPHRVPD*LGALPPYPLSHW 445
+ PT+ ++N L+ +I+S++ + + C R D L P+P H+
Sbjct: 223 DTPTFDHINSLVARIMSTSTAPYRF-NSAMCPSIRYLD----LAPFPPMHF 268
>U14634-1|AAA21559.1| 222|Caenorhabditis elegans Hypothetical
protein T15B12.1a protein.
Length = 222
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 422 PPYPLSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 532
PP P+ H + T +LP RP + S +S+ S P
Sbjct: 52 PPTPIRHVAPTITHTLPNRPNIGGIASLKSEPKMSRP 88
>AC084152-8|AAK39317.1| 541|Caenorhabditis elegans Hypothetical
protein Y102A11A.8 protein.
Length = 541
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 59 VEVPALGSLPY*WSVSPXDYGKKSKLEFAIYPAPQVSTAVVEPYN-SILTTHT 214
VE P LGSL + + VS D+ + E Y + + +PYN S+ HT
Sbjct: 220 VENP-LGSLSFAFDVSVGDFFDPTTTEATEYQETAMEPVIDQPYNISVYAGHT 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,485,315
Number of Sequences: 27780
Number of extensions: 279924
Number of successful extensions: 872
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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