Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_L02
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1682 + 35332907-35333720,35334583-35335202                       30   1.4  
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352...    30   1.8  
07_03_0868 - 22157711-22157937,22158112-22158758,22158918-22159570     29   4.2  

>04_04_1682 + 35332907-35333720,35334583-35335202
          Length = 477

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = +2

Query: 14  IKKATDKIPLKLTNTISEPRSKDSNCTKSCNTKTKREQISSITKQHQQKCKESFMET 184
           +++A D++ +K    ++EP  K      +CN  ++R    S+ KQ QQ+   S   +
Sbjct: 135 MRRAEDELKVKDKPPVAEPYCKRRASVSACNISSERSVKKSV-KQQQQEASSSLQSS 190


>03_01_0458 -
           3521938-3522024,3522133-3522213,3522673-3522806,
           3523189-3523270,3523420-3523692,3523953-3524162,
           3524252-3524337,3525197-3525289,3526003-3526227,
           3526320-3526930,3529328-3529395,3529491-3529679,
           3529773-3529901,3530013-3532484
          Length = 1579

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 44  KLTNTISEPRSKDSNCTKSCNTKTKREQISSITKQHQQKCKESF 175
           +L + +   R KDS  +   +TK K +   S T  H ++C ESF
Sbjct: 449 ELADNVGSDRDKDSMSSDIWSTKDKSDTSDSSTSPHNEEC-ESF 491


>07_03_0868 - 22157711-22157937,22158112-22158758,22158918-22159570
          Length = 508

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 77  KDSNCTKSCNTKTKREQISSITKQHQQKCKESF 175
           +D  C   CN K   +++  + K +  +C+E F
Sbjct: 367 EDGECHSECNNKYGEDELYKVDKLYNMQCQELF 399


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,645,027
Number of Sequences: 37544
Number of extensions: 238714
Number of successful extensions: 384
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)