Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_L01
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 286 5e-77
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 286 5e-77
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 286 5e-77
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 286 5e-77
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 286 5e-77
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 285 7e-77
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 284 2e-76
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 276 4e-74
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 245 1e-64
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 32 1.4
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 32 1.4
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.4
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.4
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 32 1.9
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 32 1.9
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 32 1.9
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 286 bits (701), Expect = 5e-77
Identities = 137/171 (80%), Positives = 152/171 (88%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+ + GIIL K
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWF-QQKYDGIILPGK 178
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 286 bits (701), Expect = 5e-77
Identities = 137/171 (80%), Positives = 152/171 (88%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+ + GIIL K
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWF-QQKYDGIILPGK 177
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 286 bits (701), Expect = 5e-77
Identities = 137/171 (80%), Positives = 152/171 (88%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+ + GIIL K
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWF-QQKYDGIILPGK 178
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 286 bits (701), Expect = 5e-77
Identities = 137/171 (80%), Positives = 152/171 (88%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+ + GIIL K
Sbjct: 127 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWF-QQKYDGIILPGK 176
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 286 bits (701), Expect = 5e-77
Identities = 137/171 (80%), Positives = 152/171 (88%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+ + GIIL K
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWF-QQKYDGIILPGK 177
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 285 bits (700), Expect = 7e-77
Identities = 132/156 (84%), Positives = 146/156 (93%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMK 561
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+
Sbjct: 127 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMR 162
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 284 bits (696), Expect = 2e-76
Identities = 136/171 (79%), Positives = 151/171 (88%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+ + GIIL K
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWF-QQKYDGIILPGK 177
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 276 bits (677), Expect = 4e-74
Identities = 133/171 (77%), Positives = 149/171 (87%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIGIYGL
Sbjct: 69 AVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGL 128
Query: 454 DFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
DFYVVLGRPGF++ ++R+TG +G HR++KE+AM+ + GIIL K
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWF-QQKYDGIILPGK 178
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 245 bits (599), Expect = 1e-64
Identities = 116/125 (92%), Positives = 120/125 (96%)
Frame = +1
Query: 94 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 273
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 274 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 453
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 454 DFYVV 468
DFYVV
Sbjct: 127 DFYVV 131
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 118 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 225
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 88 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 249
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 88 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 249
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 88 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 249
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 88 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 249
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 31.9 bits (69), Expect = 1.9
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -2
Query: 530 GNPTFPVLRLLCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 351
GNP P +L P G L P S P P L A +
Sbjct: 1705 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1763
Query: 350 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 186
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 1764 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 1821
Query: 185 TLAARVSLSPDSPTQM 138
+L S + P M
Sbjct: 1822 SLVVSASGAAPLPVTM 1837
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 31.9 bits (69), Expect = 1.9
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -2
Query: 530 GNPTFPVLRLLCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 351
GNP P +L P G L P S P P L A +
Sbjct: 354 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 412
Query: 350 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 186
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 413 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 470
Query: 185 TLAARVSLSPDSPTQM 138
+L S + P M
Sbjct: 471 SLVVSASGAAPLPVTM 486
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 31.9 bits (69), Expect = 1.9
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -2
Query: 530 GNPTFPVLRLLCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 351
GNP P +L P G L P S P P L A +
Sbjct: 1446 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1504
Query: 350 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 186
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 1505 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 1562
Query: 185 TLAARVSLSPDSPTQM 138
+L S + P M
Sbjct: 1563 SLVVSASGAAPLPVTM 1578
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 31.9 bits (69), Expect = 1.9
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -2
Query: 530 GNPTFPVLRLLCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 351
GNP P +L P G L P S P P L A +
Sbjct: 1528 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1586
Query: 350 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 186
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 1587 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 1644
Query: 185 TLAARVSLSPDSPTQM 138
+L S + P M
Sbjct: 1645 SLVVSASGAAPLPVTM 1660
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,211,314
Number of Sequences: 237096
Number of extensions: 2041958
Number of successful extensions: 11610
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11610
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -