BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_L01
(621 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p pro... 318 5e-87
AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA... 318 5e-87
U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal prot... 308 3e-84
BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p pro... 222 4e-58
BT024303-1|ABC86365.1| 142|Drosophila melanogaster IP12083p pro... 29 5.1
AY525767-1|AAS48649.1| 1538|Drosophila melanogaster ADAM metallo... 29 5.1
AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA... 29 5.1
AE014297-3651|AAN14023.1| 542|Drosophila melanogaster CG31105-P... 29 5.1
AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p pro... 28 8.9
AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-P... 28 8.9
>AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p
protein.
Length = 184
Score = 318 bits (780), Expect = 5e-87
Identities = 153/174 (87%), Positives = 161/174 (92%)
Frame = +1
Query: 85 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 264
D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 265 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 444
EKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71 EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130
Query: 445 YGLDFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
YGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMK + GIILN K
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWF-QQKYDGIILNTK 183
>AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA
protein.
Length = 184
Score = 318 bits (780), Expect = 5e-87
Identities = 153/174 (87%), Positives = 161/174 (92%)
Frame = +1
Query: 85 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 264
D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 265 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 444
EKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71 EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130
Query: 445 YGLDFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
YGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMK + GIILN K
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWF-QQKYDGIILNTK 183
>U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal protein
DL11 protein.
Length = 184
Score = 308 bits (757), Expect = 3e-84
Identities = 149/174 (85%), Positives = 158/174 (90%)
Frame = +1
Query: 85 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 264
D ++ +LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 265 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 444
EKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71 EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130
Query: 445 YGLDFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMGIILNXK 606
YGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMK + GIILN K
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWF-QQKYDGIILNTK 183
>BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p
protein.
Length = 163
Score = 222 bits (542), Expect = 4e-58
Identities = 107/126 (84%), Positives = 113/126 (89%)
Frame = +1
Query: 229 RYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHI 408
R VRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHI
Sbjct: 38 RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHI 97
Query: 409 DLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKVVPTRNMMG 588
DLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMK + G
Sbjct: 98 DLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWF-QQKYDG 156
Query: 589 IILNXK 606
IILN K
Sbjct: 157 IILNTK 162
>BT024303-1|ABC86365.1| 142|Drosophila melanogaster IP12083p
protein.
Length = 142
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 611 LALXLSMIPIIFLVGTTFIASSFVRRWGNPTFPV 510
+A +S+I ++ L F+A SFV +P FPV
Sbjct: 81 MATTVSLIVVLSLTWEQFVAQSFVTNLKDPLFPV 114
>AY525767-1|AAS48649.1| 1538|Drosophila melanogaster ADAM
metalloprotease CG1964 protein.
Length = 1538
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 318 KDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQP 163
K+F C+ DCT ++ + + CIP R+ SCEL L G P
Sbjct: 813 KEFVCYMG-DCT--GSICLAYGLESCQCIPGPQDDRIKSCELCCKLPGEDSP 861
>AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA
protein.
Length = 1537
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 318 KDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQP 163
K+F C+ DCT ++ + + CIP R+ SCEL L G P
Sbjct: 813 KEFVCYMG-DCT--GSICLAYGLESCQCIPGPQDDRIKSCELCCKLPGEDSP 861
>AE014297-3651|AAN14023.1| 542|Drosophila melanogaster CG31105-PA
protein.
Length = 542
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 611 LALXLSMIPIIFLVGTTFIASSFVRRWGNPTFPV 510
+A +S+I ++ L F+A SFV +P FPV
Sbjct: 74 MATTVSLIVVLSLTWEQFVAQSFVTNLKDPLFPV 107
>AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p
protein.
Length = 2171
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 198 ELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHY 100
ELL HLG Q GF T ++ L + +PHY
Sbjct: 626 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 657
>AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-PA
protein.
Length = 2599
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 198 ELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHY 100
ELL HLG Q GF T ++ L + +PHY
Sbjct: 1054 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 1085
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,424,345
Number of Sequences: 53049
Number of extensions: 606801
Number of successful extensions: 1446
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -