Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_K19
         (552 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81537-9|CAB04376.2|  673|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z81537-5|CAB04381.2|  673|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z48245-2|CAA88291.1|  309|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z37139-10|CAA85495.1|  309|Caenorhabditis elegans Hypothetical p...    28   5.1  
U95074-2|AAB94648.1|  309|Caenorhabditis elegans cyclophilin iso...    28   5.1  
U36581-1|AAC47131.1|  309|Caenorhabditis elegans cyclophilin iso...    28   5.1  
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    27   6.8  

>Z81537-9|CAB04376.2|  673|Caenorhabditis elegans Hypothetical
           protein F41D3.10 protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 335 LFDSQLFMTMRVPQHVVIKGSISTRHIWK 249
           +FD+  +  +  P+H+  +G    RH+WK
Sbjct: 639 IFDNSGYSYLTTPKHLTPRGLEHVRHVWK 667


>Z81537-5|CAB04381.2|  673|Caenorhabditis elegans Hypothetical
           protein F41D3.5 protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 335 LFDSQLFMTMRVPQHVVIKGSISTRHIWK 249
           +FD+  +  +  P+H+  +G    RH+WK
Sbjct: 639 IFDNSGYSYLTTPKHLTPRGLEHVRHVWK 667


>Z48245-2|CAA88291.1|  309|Caenorhabditis elegans Hypothetical
           protein T27D1.1 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SRTLRXRGHEDNRDIKQEQVRDES 26
           SR  R R HE NRD K+E   D S
Sbjct: 233 SRRSRSRSHEKNRDYKKENRGDSS 256


>Z37139-10|CAA85495.1|  309|Caenorhabditis elegans Hypothetical
           protein T27D1.1 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SRTLRXRGHEDNRDIKQEQVRDES 26
           SR  R R HE NRD K+E   D S
Sbjct: 233 SRRSRSRSHEKNRDYKKENRGDSS 256


>U95074-2|AAB94648.1|  309|Caenorhabditis elegans cyclophilin
           isoform 9 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SRTLRXRGHEDNRDIKQEQVRDES 26
           SR  R R HE NRD K+E   D S
Sbjct: 233 SRRSRSRSHEKNRDYKKENRGDSS 256


>U36581-1|AAC47131.1|  309|Caenorhabditis elegans cyclophilin
           isoform 9 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SRTLRXRGHEDNRDIKQEQVRDES 26
           SR  R R HE NRD K+E   D S
Sbjct: 233 SRRSRSRSHEKNRDYKKENRGDSS 256


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
           protein F42C5.10 protein.
          Length = 1292

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +2

Query: 344 IKQTAQTHC--SFEIMDPSIFLPYAPPXGLPQESK 442
           I+++  T C  S  I+ PS+F+P A P  +P++ K
Sbjct: 710 IQESKNTPCPVSQPILIPSVFVPVAVPEPIPEKPK 744


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,117,342
Number of Sequences: 27780
Number of extensions: 206710
Number of successful extensions: 442
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)