Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_K15
         (478 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0606 - 19164215-19164619                                         29   2.6  
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435...    28   3.4  
05_07_0224 + 28500745-28500978,28501933-28502332,28502416-285024...    27   5.9  
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133...    27   7.8  

>10_08_0606 - 19164215-19164619
          Length = 134

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 352 PSRWSNITITTWSLNLFDGHFSTRKDY 432
           P   + ITITTW+L+L D H ++ +++
Sbjct: 103 PPSTAEITITTWTLDLQDDHSTSTQNW 129


>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
            42543601-42543744,42543840-42544013,42544056-42544369,
            42544467-42544636,42544916-42545043,42545125-42545185,
            42545473-42545642,42545783-42547387,42547479-42547631,
            42547747-42547905,42548066-42548236,42548357-42548404,
            42548509-42548624,42548885-42549029,42549122-42549220
          Length = 1570

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = -3

Query: 206  KVAGDGRFIDLDRN***HRFSSRSSEICL*HGNTKATTFEKALKRAFVANYNEPCSDATT 27
            K+AG+G +I +DR+   H   SR   +    G+ K  +++K L+    A Y +  +D+  
Sbjct: 1509 KIAGNGNYITVDRHQVFH--GSRCLYVMSSDGSRKDFSYKKCLENYIRAQYPD-AADSFC 1565

Query: 26   RDYIE 12
            R Y +
Sbjct: 1566 RKYFK 1570


>05_07_0224 +
           28500745-28500978,28501933-28502332,28502416-28502480,
           28502633-28502692,28502865-28503014,28503386-28503541,
           28503648-28503785,28503874-28503947,28504172-28504273,
           28505415-28505604,28505756-28505830
          Length = 547

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 2   DSSFRCNHE*SRRYRAHC-SSPRKPFSVPFQM*SPSYSHVKGRFLSFERK 148
           +S  +  +E +RRY ++    PR PF+  F    P   H+  R L+F+ K
Sbjct: 299 ESLAKIRNEKARRYLSNMRKKPRVPFTKKFPGVDPMALHLLERLLAFDPK 348


>01_06_0042 -
           25911662-25911736,25912409-25912607,25913275-25913348,
           25913431-25913580,25913666-25913821,25915378-25915464,
           25915706-25915765,25915878-25916414,25917292-25917585
          Length = 543

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 23  HE*SRRYRAHC-SSPRKPFSVPFQM*SPSYSHVKGRFLSFERK 148
           +E +RRY  +    PR PFS  F    P   H+  R L+F+ K
Sbjct: 329 NEKARRYLGNMRKKPRVPFSQKFPGADPMALHLLERLLAFDPK 371


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,216,269
Number of Sequences: 37544
Number of extensions: 246207
Number of successful extensions: 533
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)